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30
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36
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66
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obiclean --without-progress-bar not working
#33
· opened
May 15, 2017
by
sproft
0
updated
Sep 29, 2017
obisilva fails with --ssu option
#32
· opened
Apr 20, 2017
by
Philippe Bordron
CLOSED
1
updated
Sep 29, 2017
Missing esmre module in requirements.txt
#31
· opened
Mar 20, 2017
by
Philippe Bordron
CLOSED
1
updated
Sep 29, 2017
Missing shebang in extractreads.py and extractreads2.py
#30
· opened
Mar 20, 2017
by
Philippe Bordron
CLOSED
1
updated
Jan 18, 2020
Missing mitochondrial genomes
#29
· opened
Feb 16, 2017
by
Filipe Figueiredo
CLOSED
1
updated
Sep 29, 2017
Obiclean index error
#27
· opened
Oct 30, 2016
by
Katrina West
CLOSED
4
updated
Jun 20, 2024
Installation issue
#26
· opened
Oct 26, 2016
by
Katrina West
CLOSED
5
updated
Sep 29, 2017
Error running obiclean
#24
· opened
Jul 28, 2016
by
Frederik Seersholm
CLOSED
1
updated
Sep 29, 2017
Bug in obiselect following commit 46b446f0
#23
· opened
Feb 17, 2016
by
Aurélie Bonin
Bug
Critical
CLOSED
1
updated
Sep 29, 2017
Supin bug in obitaxonomy
#20
· opened
Jan 07, 2016
by
Eric Coissac
Bug
CLOSED
0
updated
Sep 29, 2017
obiconvert: GenBank/FASTA input to ecoPCR database
#18
· opened
Dec 22, 2015
by
Nicholas Lim
CLOSED
0
updated
Sep 29, 2017
OBITools not running on 32bits Ubuntu
#28
· opened
Dec 13, 2016
by
Celine Mercier
Bug
0
updated
Sep 29, 2017
ecoPCR issue
#17
· opened
Dec 14, 2015
by
Antonino Malacrinò
CLOSED
4
updated
Sep 29, 2017
Add a new tools selecting the most aboundant sequences per samples
#16
· opened
Nov 12, 2015
by
Eric Coissac
feature
CLOSED
1
updated
Sep 29, 2017
installation problem
#25
· opened
Sep 29, 2016
by
Camila Duarte
6
updated
Aug 09, 2023
UTF-8 installation problem
#14
· opened
Oct 01, 2015
by
Celine Mercier
Bug
CLOSED
1
updated
Sep 29, 2017
Error in the documentation of the --merge option of obiselect
#22
· opened
Feb 17, 2016
by
Aurélie Bonin
documentation
0
updated
Sep 29, 2017
obiclean bug
#13
· opened
Aug 05, 2015
by
Celine Mercier
Bug
Critical
CLOSED
0
updated
Sep 29, 2017
Obiconvert error (in the _ecoSeqPacker function)
#21
· opened
Feb 08, 2016
by
Celine Mercier
Bug
CLOSED
3
updated
Jan 18, 2019
skip option lead illuminapairedend to crash
#11
· opened
Jul 11, 2015
by
Frédéric Boyer
Bug
Critical
CLOSED
1
updated
Sep 29, 2017
ngsfilter clash if there is one (or two?) serie(s) of "n" longer than the primers
#19
· opened
Dec 29, 2015
by
Ghost User
Bug
2
updated
Mar 18, 2022
obiaddtaxids: add a parser for the UNITE 'general FASTA release' format
#9
· opened
Jun 11, 2015
by
Celine Mercier
feature
CLOSED
0
updated
Sep 29, 2017
SILVA reference database parsing
#15
· opened
Oct 01, 2015
by
Celine Mercier
feature
1
1
updated
Sep 29, 2017
obiconvert bug
#8
· opened
Jun 02, 2015
by
Celine Mercier
Bug
CLOSED
0
updated
Sep 29, 2017
ngsfilter produces assigned-file with "forward_tag=None" or "reverse_tag=None"
#12
· opened
Jul 21, 2015
by
Tobias Frøslev
1
updated
Sep 29, 2017
Another installation problem, with setup.py
#7
· opened
Jun 01, 2015
by
Celine Mercier
Bug
CLOSED
1
updated
Sep 29, 2017
obitools activating script loose local setting
#10
· opened
Jun 18, 2015
by
Eric Coissac
0
updated
Sep 29, 2017
Installation problem
#6
· opened
Jun 01, 2015
by
Celine Mercier
Bug
CLOSED
2
updated
Sep 29, 2017
Branch names
#5
· opened
May 28, 2015
by
Eric Coissac
Critical
CLOSED
3
updated
Sep 29, 2017
obiclean: mettre un exemple dans la doc avec -s
#4
· opened
May 20, 2015
by
Ghost User
1
updated
Jun 05, 2024
Installer does not support UTF8
#2
· opened
May 17, 2015
by
Eric Coissac
Bug
2
updated
Sep 29, 2017
--rank should be --seq_rank in obiannotate
#3
· opened
May 20, 2015
by
Ghost User
CLOSED
2
updated
Jan 17, 2018
ecoPCR help
#1
· opened
May 13, 2015
by
Aurélie Bonin
Bug
documentation
CLOSED
3
updated
Jan 17, 2018
Why isn't 'obiclean_headcount > 0' the same as 'obiclean_head == True'?
#34
· opened
Jun 20, 2018
by
Dani Díaz de Quijano
CLOSED
1
updated
Nov 19, 2018
ngsfilter discarding many records as "unidentified"
#35
· opened
Jul 03, 2018
by
Patrick Shea
2
updated
Jun 05, 2019
obiannotate -C working partially
#36
· opened
Aug 22, 2018
by
Lucie Zinger
1
updated
Nov 03, 2022
ecotag: Assertion Error
#37
· opened
Jan 07, 2019
by
Charles Baillie
CLOSED
1
updated
May 09, 2019
Error in building the reference database
#38
· opened
Jan 18, 2019
by
Harsh Shukla
CLOSED
24
updated
Oct 02, 2019
ecoTag hanging
#39
· opened
Jan 31, 2019
by
Patrick Freeman
CLOSED
2
updated
Feb 11, 2019
Issue when running obiconvert -d ncbi --ecopcrdb-output
#40
· opened
Feb 11, 2019
by
Alejandro Maeda Obregon
CLOSED
1
updated
May 09, 2019
Error when running Ecotag
#41
· opened
Feb 19, 2019
by
Tania Valdivia-Carrillo
CLOSED
1
updated
May 09, 2019
ngsfilter: AssertionError: tag pair
#42
· opened
May 06, 2019
by
Omer Golan
CLOSED
1
updated
May 09, 2019
ecotag bug with short sequences
#43
· opened
Jun 21, 2019
by
Celine Mercier
Bug
1
updated
Oct 04, 2019
extractread2
#44
· opened
Aug 06, 2019
by
Emily Dziedzic
0
updated
Aug 06, 2019
Please port to Python3
#45
· opened
Aug 21, 2019
by
Andreas Tille
0
updated
Aug 21, 2019
ngsfilter: AssertionError
#46
· opened
Aug 28, 2019
by
Christina P
2
updated
Nov 01, 2022
obisilva not working
#47
· opened
Sep 12, 2019
by
Christina T
0
updated
Sep 12, 2019
Trouble with ecoPCR/ecotag
#48
· opened
Sep 13, 2019
by
Matthew Hopken
CLOSED
8
updated
Apr 08, 2023
Could not import sequence id: AE005172; (error raised: 'NoneType' object has no attribute 'group' )
#49
· opened
Oct 03, 2019
by
Marc-Olivier Beausoleil
CLOSED
9
updated
Jun 20, 2024
Error in ngsfilter: AssertionError: tag pair (None, None) is already used with primer pairs
#50
· opened
Oct 10, 2019
by
Lotte Skovmand
2
3
updated
Jan 18, 2020
ecoPCR freezes without finishing.
#51
· opened
Nov 18, 2019
by
Brian Gill
CLOSED
1
updated
Nov 19, 2019
error message in obicomplement
#52
· opened
Dec 12, 2019
by
Lucie Zinger
CLOSED
0
updated
Dec 12, 2019
ngsfilter
#53
· opened
Jan 17, 2020
by
Gabriele Cananzi
CLOSED
0
updated
Jan 23, 2020
ecotag blocked
#54
· opened
Mar 18, 2020
by
Luca Turolo
0
updated
Mar 18, 2020
asymmetry in simpleLCS()
#55
· opened
May 04, 2020
by
Lara Urban
0
updated
May 04, 2020
Using Genbank databases for ecoPCR
#56
· opened
Sep 04, 2020
by
Rasit Bilgin
0
updated
Sep 04, 2020
AttributeError: 'itertools.chain' object has no attribute 'next'
#57
· opened
Sep 17, 2020
by
Cré l
2
updated
Nov 01, 2022
obipr2 not working
#58
· opened
Nov 06, 2020
by
Dani Díaz de Quijano
0
updated
Nov 06, 2020
obistat -s seq_length -v seq_length not working
#59
· opened
Nov 27, 2020
by
peter_ssss
0
updated
Nov 27, 2020
Trouble installing OBITools
#60
· opened
Jan 18, 2021
by
Amalia Mailli
1
updated
Aug 09, 2023
obiconvert issue
#61
· opened
Feb 08, 2021
by
Gabriele Cananzi
CLOSED
0
updated
Feb 10, 2021
Problem in making database for metabarcoding analysis
#62
· opened
Mar 14, 2021
by
saeed mohamadzade
0
updated
Mar 14, 2021
Explore tips for how to borrow money from the cash app:
#63
· opened
Apr 08, 2022
by
kevin Andrew
1
updated
Nov 03, 2022
OBITools problem with obiclean
#85
· opened
Sep 12, 2023
by
Elise Sivault
0
updated
Sep 12, 2023
Innovation Education: Evaluating Design Thinking And Problem-Solving
#86
· opened
Dec 27, 2023
by
Do My Online Exams
1
updated
Jun 05, 2024
ngsfilter: no tag means no sample identified?
#87
· opened
Feb 29, 2024
by
Xiaomeng Qi
1
updated
Jun 21, 2024