Anthony HombiatThe PhyloAlps Project
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Standards
Institutions
- TDWG: Biodiversity Information Standards Group
- HCLSIG: W3C Health Care and Life Sciences Interest Group
- BGCI: Botanic Gardens Conservation International
- NCEI: National Center for Environmental Information
- ISB: International Society for Biocuration
- Species 2000
- BioSharing
Frameworks
- GUID LSID: Global Unique Identifier Life Science ID
- ABCD: Access to Biological Collections Data schema
- SDD: Structure of Descriptive Data
- ISA: Investigation, Study and Assay framework
- SPICE: Species 2000 Interoperability Co-ordination Environment
- BioDBcore: generic description of the core attributes of biological databases
- VoID: The Vocabulary of Interlinked Datasets
Ontologies
- DwC: Darwin Core
- DwC-A: Darwin Core Archive
- TCS: Taxonomic Concept (Transfer) Schema
- LinkedISA
- OBO Foundry: Open Biomedical Ontology Foundry
- GO: Gene Ontology
- PO: Plant Ontology
- GONG: Gene Ontology Next Generation
- MGED: Micro Array Gene Expression Data
Markup languages
- MAGE-ML: MicroArray Gene Expression Markup Language
- KGML: KEGG Kyoto Encyclopedia of Genes and Genomes Markup Language
- EML: Ecological Markup Language
Tools
- Bio2RDF: Life Science Linked Data
- BioCatalogue: The Life Science Web Services Registry
- BioCASE: Biological Collection Access SErvice
- iPhylo: Taxonomic id reconciliation with Google Refine
- MNHN TaxRef Match: Taxonomic id reconciliation (work in progress)