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standards · Changes

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Add Darwin Core paper to biblio. authored Jun 23, 2017 by Anthony Hombiat's avatar Anthony Hombiat
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standards.md
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...@@ -26,13 +26,17 @@ ...@@ -26,13 +26,17 @@
| Topic | Prefix | Full name | Namespace | VOWL | LOV | Doc | | Topic | Prefix | Full name | Namespace | VOWL | LOV | Doc |
|---|---|---|---|---|---|---| |---|---|---|---|---|---|---|
| People | foaf | Friend Of A Friend | http://xmlns.com/foaf/0.1/ | [VOWL](http://visualdataweb.de/webvowl/#iri=http://xmlns.com/foaf/0.1/) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/foaf) | [Doc](http://xmlns.com/foaf/spec/) | | People | `foaf` | Friend Of A Friend | http://xmlns.com/foaf/0.1/ | [VOWL](http://visualdataweb.de/webvowl/#iri=http://xmlns.com/foaf/0.1/) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/foaf) | [Doc](http://xmlns.com/foaf/spec/) |
| People | sioc | Semantically Interlinked Online Community | http://rdfs.org/sioc/ns# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://rdfs.org/sioc/ns#) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/sioc) | [Doc](http://rdfs.org/sioc/spec/) | | People | `sioc` | Semantically Interlinked Online Community | http://rdfs.org/sioc/ns# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://rdfs.org/sioc/ns#) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/sioc) | [Doc](http://rdfs.org/sioc/spec/) |
| People | org | Organization | http://www.w3.org/ns/org# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/org) | [Doc](https://www.w3.org/TR/vocab-org/) | | People | `org` | Organization | http://www.w3.org/ns/org# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/org) | [Doc](https://www.w3.org/TR/vocab-org/) |
| People | vcard | vCard | http://www.w3.org/2006/vcard/ns# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/vcard) | [Doc](http://www.w3.org/TR/vcard-rdf/) | | People | `vcard` | vCard | http://www.w3.org/2006/vcard/ns# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/vcard) | [Doc](http://www.w3.org/TR/vcard-rdf/) |
| Taxon | dwc| Darwin Core | http://rs.tdwg.org/dwc/terms/ | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/dwc/master/rdf/dwcterms.rdf) | | [Doc](http://rs.tdwg.org/dwc/terms/guides/rdf/) | | Taxon | `dwc` | Darwin Core | http://rs.tdwg.org/dwc/terms/ | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/dwc/master/rdf/dwcterms.rdf) | | [Doc](http://rs.tdwg.org/dwc/terms/guides/rdf/) |
| Taxon | tc | Taxon Concept | http://rs.tdwg.org/ontology/voc/TaxonConcept# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonConcept.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) | | Taxon | `tc` | Taxon Concept | http://rs.tdwg.org/ontology/voc/TaxonConcept# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonConcept.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) |
| Taxon | tn| Taxon Name | http://rs.tdwg.org/ontology/voc/TaxonName# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonName.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) | | Taxon | `tn`| Taxon Name | http://rs.tdwg.org/ontology/voc/TaxonName# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonName.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) |
| Gene | `obi` | Ontology for Biomedical Investigations | http://purl.obolibrary.org/obo/obi# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/obo) | [Doc](https://bioportal.bioontology.org/ontologies/OBI/) |
| Gene | `so` | Sequence Ontology | # | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/obi-ontology/obi/v2017-02-22/obi_core.owl) | http://purl.obolibrary.org/obo/so# | [Doc](http://www.sequenceontology.org) |
| Traits | `pato` | Phenotypic Traits Ontology | http://purl.obolibrary.org/obo/pato# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/pato.owl) | | [Doc](https://github.com/pato-ontology/pato/) |
| Traits | `po` | Plant Ontology | http://purl.obolibrary.org/obo/po# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/po.owl) | | [Doc](http://obofoundry.org/ontology/po.html) |
See also See also
* [W3C vocabularies for describing people]) * [W3C vocabularies for describing people])
...@@ -46,17 +50,10 @@ See also ...@@ -46,17 +50,10 @@ See also
#### Gene #### Gene
* **[OBI]**: Ontology for Biomedical Investigations
* **[GO]**: Gene Ontology * **[GO]**: Gene Ontology
* **[SO]**: Sequence Ontology
* **[GONG]**: Gene Ontology Next Generation * **[GONG]**: Gene Ontology Next Generation
* **[MGED]**: Micro Array Gene Expression Data * **[MGED]**: Micro Array Gene Expression Data
#### Phenotypic traits
* **[PO]**: Plant Ontology
* **[PATO]**: Phenotypic qualities
### Frameworks ### Frameworks
* **[GUID LSID]**: Global Unique Identifier Life Science ID * **[GUID LSID]**: Global Unique Identifier Life Science ID
* **[TCS]**: Taxonomic Concept (Transfer) Schema * **[TCS]**: Taxonomic Concept (Transfer) Schema
...@@ -110,7 +107,6 @@ See also ...@@ -110,7 +107,6 @@ See also
[LinkedISA]:https://isa-tools.github.io/linkedISA/ [LinkedISA]:https://isa-tools.github.io/linkedISA/
[GO]:http://www.geneontology.org/ [GO]:http://www.geneontology.org/
[PO]:http://obofoundry.org/ontology/po.html
[GONG]:http://gong.man.ac.uk/ [GONG]:http://gong.man.ac.uk/
[MGED]:http://mged.sourceforge.net/ontologies/MGEDontology.php [MGED]:http://mged.sourceforge.net/ontologies/MGEDontology.php
[EML]:https://knb.ecoinformatics.org/#external//emlparser/docs/index.html [EML]:https://knb.ecoinformatics.org/#external//emlparser/docs/index.html
......
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