standards.md

@@ -22,7 +22,7 @@
 * **[Species 2000]**
 * **[BioSharing]**
 
-### Ontologies
+### Ontologies (see the [OBO Foundry]: Open Biomedical Ontology Foundry)
 
 #### People ([W3C vocabularies for describing people])
 * **[FOAF]**: Friend Of A Friend
@@ -40,12 +40,19 @@
 * **[LinkedISA]**: Investigation, Study and Assay framework
 * **[Audubon]**: Biodiversity related media
 * **[VoID]**: The Vocabulary of Interlinked Datasets
-* **[OBO Foundry]**: Open Biomedical Ontology Foundry
+
+#### Gene
+
+* **[OBI]**: Ontology for Biomedical Investigations
 * **[GO]**: Gene Ontology
-* **[PO]**: Plant Ontology
 * **[GONG]**: Gene Ontology Next Generation
 * **[MGED]**: Micro Array Gene Expression Data
 
+#### Phenotypic traits
+
+* **[PO]**: Plant Ontology
+* **[PATO]**: Phenotypic qualities
+
 ### Frameworks
 * **[GUID LSID]**: Global Unique Identifier Life Science ID
 * **[ABCD]**: Access to Biological Collections Data schema
@@ -101,6 +108,8 @@
 [GONG]:http://gong.man.ac.uk/
 [MGED]:http://mged.sourceforge.net/ontologies/MGEDontology.php
 [EML]:https://knb.ecoinformatics.org/#external//emlparser/docs/index.html
+[PATO]:https://raw.githubusercontent.com/pato-ontology/pato/master/pato.owl
+[OBI]:https://raw.githubusercontent.com/obi-ontology/obi/v2017-02-22/obi.owl
 
 [mage-ml]:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC126871/
 [kgml]:http://www.genome.jp/kegg/xml/