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standards · Changes

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Update the Phyloalps biblio. authored Jun 26, 2017 by Anthony Hombiat's avatar Anthony Hombiat
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standards.md
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### Ontologies
| Topic | Prefix | Full name | Namespace | VOWL | LOV | Doc |
|---|---|---|---|---|---|---|
| People | `foaf` | Friend Of A Friend | http://xmlns.com/foaf/0.1/ | [VOWL](http://visualdataweb.de/webvowl/#iri=http://xmlns.com/foaf/0.1/) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/foaf) | [Doc](http://xmlns.com/foaf/spec/) |
| People | `sioc` | Semantically Interlinked Online Community | http://rdfs.org/sioc/ns# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://rdfs.org/sioc/ns#) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/sioc) | [Doc](http://rdfs.org/sioc/spec/) |
| People | `org` | Organization | http://www.w3.org/ns/org# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/org) | [Doc](https://www.w3.org/TR/vocab-org/) |
| People | `vcard` | vCard | http://www.w3.org/2006/vcard/ns# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/vcard) | [Doc](http://www.w3.org/TR/vcard-rdf/) |
| Taxon | `dwc` | Darwin Core | http://rs.tdwg.org/dwc/terms/ | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/dwc/master/rdf/dwcterms.rdf) | | [Doc](http://rs.tdwg.org/dwc/terms/guides/rdf/) |
| Taxon | `tc` | Taxon Concept | http://rs.tdwg.org/ontology/voc/TaxonConcept# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonConcept.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) |
| Taxon | `tn`| Taxon Name | http://rs.tdwg.org/ontology/voc/TaxonName# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonName.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) |
| Taxon | `taxrank`| Taxonomic Rank | http://purl.obolibrary.org/obo/taxrank.owl# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/taxrank.owl) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) |
| Gene | `obi` | Ontology for Biomedical Investigations | http://purl.obolibrary.org/obo/obi# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/obo) | [Doc](https://bioportal.bioontology.org/ontologies/OBI/) |
| Gene | `so` | Sequence Ontology | http://purl.obolibrary.org/obo/so# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/obi-ontology/obi/v2017-02-22/obi_core.owl) | | [Doc](http://www.sequenceontology.org) |
| Gene | `go` | Gene Ontology | http://purl.obolibrary.org/obo/go# | | | [Doc](http://geneontology.org/) |
| Traits | `pato` | Phenotypic Traits Ontology | http://purl.obolibrary.org/obo/pato# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/pato.owl) | | [Doc](https://github.com/pato-ontology/pato/) |
| Traits | `po` | Plant Ontology | http://purl.obolibrary.org/obo/po# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/po.owl) | | [Doc](http://obofoundry.org/ontology/po.html) |
| Topic | Prefix | Full name | Namespace | VOWL | LOV | Doc | Comment |
|---|---|---|---|---|---|---|---|
| People | `foaf` | Friend Of A Friend | http://xmlns.com/foaf/0.1/ | [VOWL](http://visualdataweb.de/webvowl/#iri=http://xmlns.com/foaf/0.1/) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/foaf) | [Doc](http://xmlns.com/foaf/spec/) | |
| People | `sioc` | Semantically Interlinked Online Community | http://rdfs.org/sioc/ns# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://rdfs.org/sioc/ns#) | [LOV](http://lov.okfn.org/dataset/lov/vocabs/sioc) | [Doc](http://rdfs.org/sioc/spec/) | |
| People | `org` | Organization | http://www.w3.org/ns/org# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/org) | [Doc](https://www.w3.org/TR/vocab-org/) | |
| People | `vcard` | vCard | http://www.w3.org/2006/vcard/ns# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/vcard) | [Doc](http://www.w3.org/TR/vcard-rdf/) | |
| Taxon | `dwc` | Darwin Core | http://rs.tdwg.org/dwc/terms/ | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/dwc/master/rdf/dwcterms.rdf) | | [Doc](http://rs.tdwg.org/dwc/terms/guides/rdf/) | |
| Taxon | `tc` | Taxon Concept | http://rs.tdwg.org/ontology/voc/TaxonConcept# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonConcept.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) | |
| Taxon | `tn`| Taxon Name | http://rs.tdwg.org/ontology/voc/TaxonName# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/tdwg/ontology/master/ontology/voc/TaxonName.rdf) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) | |
| Taxon | `taxrank`| Taxonomic Rank | http://purl.obolibrary.org/obo/taxrank.owl# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/taxrank.owl) | | [Doc](https://github.com/tdwg/rdf/blob/master/TCSBasedTaxon.md) | NCBI Taxonomy + TDWG TaxonRank + Teleost Taxonomy |
| Gene | `obi` | Ontology for Biomedical Investigations | http://purl.obolibrary.org/obo/obi# | | [LOV](http://lov.okfn.org/dataset/lov/vocabs/obo) | [Doc](https://bioportal.bioontology.org/ontologies/OBI/) | |
| Gene | `so` | Sequence Ontology | http://purl.obolibrary.org/obo/so# | [VOWL](http://visualdataweb.de/webvowl/#iri=https://raw.githubusercontent.com/obi-ontology/obi/v2017-02-22/obi_core.owl) | | [Doc](http://www.sequenceontology.org) | |
| Gene | `go` | Gene Ontology | http://purl.obolibrary.org/obo/go# | | | [Doc](http://geneontology.org/) | |
| Traits | `pato` | Phenotypic Traits Ontology | http://purl.obolibrary.org/obo/pato# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/pato.owl) | | [Doc](https://github.com/pato-ontology/pato/) | |
| Traits | `po` | Plant Ontology | http://purl.obolibrary.org/obo/po# | [VOWL](http://visualdataweb.de/webvowl/#iri=http://purl.obolibrary.org/obo/po.owl) | | [Doc](http://obofoundry.org/ontology/po.html) | |
See also
* [W3C vocabularies for describing people])
......
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