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* **[FRB]**: Fondation pour la Recherche en Biodiversité * **[FRB]**: Fondation pour la Recherche en Biodiversité
* **[BOLD]**: metabarcoding (not complete genome, taxonomic markers, 2 genes: matK et rbcL) * **[BOLD]**: metabarcoding (not complete genome, taxonomic markers, 2 genes: matK et rbcL)
* **[INSD]**: International Nucleotide Sequence Database collaboration : * **[INSD]**: International Nucleotide Sequence Database collaboration :
* **NCBI [GenBank]**: National Center for Biotechnology Information * **[NCBI]**: National Center for Biotechnology Information
* **[EMBL]**: European Molecular Biology Laboratory * **[EMBL]**: European Molecular Biology Laboratory
* **[DDBJ]**: DNA DB of Japan European Molecular Biology Lab (down for the moment) * **[DDBJ]**: DNA DB of Japan European Molecular Biology Lab (down for the moment)
* **[Phylota]**: plants browser
* **FloraAlpina** (paper version only)
* **[Tela Botanica]**: association de botanique de référence pour la botanique numérique * **[Tela Botanica]**: association de botanique de référence pour la botanique numérique
* **[The Plant list]** (cf. [Kew project]: exons sequencing) * **[The Plant list]** (cf. [Kew project]: exons sequencing)
* **[Biocatalogue]**: The Life Science Web Services Registry * **[Biocatalogue]**: The Life Science Web Services Registry
* **[EOL]**: Encyclopedia of Life
* **[USDA]**: United States Department of Agriculture * **[USDA]**: United States Department of Agriculture
* **[MoBot]**: MissOuri BOTanical garden * **[MoBot]**: Missouri Botanical garden
* **[MNHN]**: Musée National d'Histoire Naturelle * **[MNHN]**: Musée National d'Histoire Naturelle
# Data sources ## Data sources
Name | Data type | Availability | Access | Comment Name | Data type | Availability | Access | Comment
--- | --- | --- | --- | --- --- | --- | --- | --- | ---
...@@ -66,6 +63,7 @@ FloraAlpina | Phenotypic traits of Alpine plants | © | Book | Paper version onl ...@@ -66,6 +63,7 @@ FloraAlpina | Phenotypic traits of Alpine plants | © | Book | Paper version onl
**[NCBI GenBank E-utilities]** | Taxonomy, DNA data bank | [ODbL] | REST API | **[NCBI GenBank E-utilities]** | Taxonomy, DNA data bank | [ODbL] | REST API |
**[EMBL-EBI Ensembl]** | Taxonomy, DNA data bank | Third Party | REST API, SPARQL endpoint | Clients available for Perl/Python/Java **[EMBL-EBI Ensembl]** | Taxonomy, DNA data bank | Third Party | REST API, SPARQL endpoint | Clients available for Perl/Python/Java
**[DDBJ WABI]** | Taxonomy, DNA data bank | © | REST API | Some docs in Japanese **[DDBJ WABI]** | Taxonomy, DNA data bank | © | REST API | Some docs in Japanese
[Phylota] | DNA data bank | | HMI |
[iPlant TNRS] | Nomenclature, synonyms | Available | REST API | Fuzzy name matching [iPlant TNRS] | Nomenclature, synonyms | Available | REST API | Fuzzy name matching
[MNHN TaxRef] | Taxonomy | Available | | [MNHN TaxRef] | Taxonomy | Available | |
[The Plant list] | Nomenclature, synonyms | ![CC BY-NC-ND] | HMI | > 10 data sources, 3-levels trust model [The Plant list] | Nomenclature, synonyms | ![CC BY-NC-ND] | HMI | > 10 data sources, 3-levels trust model
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