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* Mapping of relational data to [RDF] ([W3C R2RML specification])
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## Data Providers
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* NCBI's *[Entrez Programming Utilities]* (E-utilities)
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Nota:
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> NCBI places no restrictions on the use or distribution of the GenBank data. However, some submitters may claim patent, copyright, or other intellectual property rights in all or a portion of the data they have submitted.
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* EMBL-EBI
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* [Web Services]
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* RDF platform [Ensembl]
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* **Herbier PhyloAlps** (en cours de réalisation), QR code (référence espèce et séquence)
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* **Herbier du [CBNA]** : conservatoire Botanique Nationaux (CBN Alpin à Briançon et CBN Méditerranéen)
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* **[GBIF]** : Global Biodiversity Information Facility (occurrences, observations, /!\ couverture)
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* **[Androsace]** : traits biologiques de référence pour les plantes Alpines (voir avec Julien pour la disponibilité des données)
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* **[IFB]** : Institut Français pour la Bioinformatique
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* **[FRB]** : Fondation pour la Recherche en Biodiversité
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* **[BOLD]** : pas le génome complet (marqueurs taxonomiques, 2 gènes matK et rbcL)
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* **[INSD]** : International Nucleotide Sequence Database Collaboration :
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* **NCBI [GenBank]** : National Center for Biotechnology Information
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* [Entrez Programming Utilities]* (E-utilities)
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* **[EMBL]** : European Molecular Biology Laboratory
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* [EMBL-EBI Web Services]
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* [EMBL-EBI RDF platform Ensembl]
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* **[DDBJ]** : DNA DB of Japan European Molecular Biology Lab
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* **[UniProtKB]** (Swiss-Prot) utilise [EMBL]
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* **[Phylota]** : browser pour les plantes
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* **FloraAlpina** (version électronique ?)
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* **[Tela Botanica]** : association de botanique de référence pour la botanique numérique
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* **[Plant list]** (cf. [Kew project] : séquençage d'exons)
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* [Biocatalogue]
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## Gene Ontologies
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[rdf]:https://www.w3.org/RDF/
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[w3c r2rml specification]:https://www.w3.org/TR/r2rml/
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[entrez programming utilities]:https://www.ncbi.nlm.nih.gov/books/NBK25501/
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[web services]:http://www.ebi.ac.uk/Tools/webservices/
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[Ensembl]:https://www.ebi.ac.uk/rdf/documentation/ensembl
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[EMBL-EBI web services]:http://www.ebi.ac.uk/Tools/webservices/
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[EMBL-EBI RDF platform Ensembl]:https://www.ebi.ac.uk/rdf/documentation/ensembl
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[biocatalogue]:https://www.biocatalogue.org/
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[hclsig]:https://www.w3.org/wiki/HCLSIG
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[GO]:http://www.geneontology.org/
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[MGED]:http://mged.sourceforge.net/ontologies/MGEDontology.php
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[mage-ml]:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC126871/
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[kgml]:http://www.genome.jp/kegg/xml/
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[CBNA]:http://www.cbn-alpin-biblio.fr/
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[GBIF]:http://www.gbif.org/
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[Androsace]:http://androsace.ujf-grenoble.fr/
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[IFB]:https://www.france-bioinformatique.fr/
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[FRB]:http://www.fondationbiodiversite.fr/fr/
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[BOLD]:http://www.boldsystems.org/
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[INSD]:https://www.ncbi.nlm.nih.gov/genbank/collab/
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[GenBank]:https://www.ncbi.nlm.nih.gov/genbank/
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[EMBL]:http://embl.org/
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[DDBJ]:http://www.ddbj.nig.ac.jp/
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[UniProtKB]:https://www.ebi.ac.uk/uniprot
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[Phylota]:http://phylota.net/
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[Plant list]:http://www.theplantlist.org/
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[Kew project]:http://www.kew.org/
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[Tela Botanica]:http://www.tela-botanica.org/ |
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\ No newline at end of file |
