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archi · Changes

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Update archi authored Sep 18, 2018 by Anthony Hombiat's avatar Anthony Hombiat
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archi.md
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......@@ -20,3 +20,36 @@
### PhyloAlps Taxonomy Service
![PhyloAlps Taxonomy Service](archi/taxonomy-service.png)
### PhyloAlps Virtual Hosts Communication
#### DNA assembly graph rendering
```mermaid
sequenceDiagram
participant user as PhyloAlps user
participant data as Data VH
participant seq as RawSeq VH
user->>+data: GET http://data.phyloalps.org/assembly/001
data->>+seq: GET http://seq.phyloalps.org/assemblies/001.gml
seq->>-data: File 001.gml
data->>data: Parse foo.gml
data->>-user: Render DNA assembly graph
```
#### Taxonomy browsing
```mermaid
sequenceDiagram
participant user as PhyloAlps user
participant data as Data VH
participant taxo as Taxonomy VH
data->>data:select node 'Viridiplantae'
opt select node
user->>+data: click on a node of the taxonomy tree
data-x+taxo: GET taxo.phyloalps.org/sparql/getChildrenOfSomeTaxon
taxo->>-data: children in JSON format
data->>data: Trigger D3.js render method
data->>-user: Render first level of taxonomy tree
end
```
\ No newline at end of file
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