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OBITools3
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  • Issues

  • Open 33
  • Closed 107
  • All 140
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual
  • Tabular export has no header by default
    #109 · opened Jun 14, 2021 by Frédéric Boyer   enhancement
    • CLOSED
    • 1
    • 1
    updated Jul 21, 2021
  • export integer missing values as '0' for tables
    #108 · opened Jun 14, 2021 by Frédéric Boyer   enhancement
    • CLOSED
    • 1
    • 0
    updated Jul 21, 2021
  • obi rename
    #113 · opened Jul 18, 2021 by Eric Coissac   documentation enhancement feature
    • 1
    updated Jul 21, 2021
  • obi grep fails with 'No local taxa'
    #106 · opened Apr 20, 2021 by Fabian Roger
    • CLOSED
    • 2
    updated Jul 06, 2021
  • Error when a folder has the same path and name as a DMS
    #105 · opened Apr 15, 2021 by Celine Mercier   bug
    • 0
    updated Apr 15, 2021
  • obi import error
    #87 · opened Feb 02, 2021 by Mitica Ciorpac
    • CLOSED
    • 6
    updated Apr 15, 2021
  • Issues aligning paired end sequences with alignpairedend
    #102 · opened Mar 30, 2021 by Thomas D Hughes
    • CLOSED
    • 5
    updated Apr 07, 2021
  • escape character in option value
    #101 · opened Mar 28, 2021 by Celine Mercier   bug
    • CLOSED
    • 1
    updated Apr 06, 2021
  • ngsfilter: identify primer dimers
    #99 · opened Mar 21, 2021 by Celine Mercier   enhancement
    • 0
    updated Mar 21, 2021
  • add a rm subcommand
    #92 · opened Feb 11, 2021 by Eric Coissac   feature
    • CLOSED
    • 1
    updated Mar 21, 2021
  • obi annotate
    #90 · opened Feb 10, 2021 by Gabriele Cananzi
    • CLOSED
    • 2
    updated Mar 14, 2021
  • Make the OBI3 work on the WSL (Windows Subsystem for Linux)
    #68 · opened Aug 24, 2019 by Celine Mercier   critical feature
    • CLOSED
    • 3
    updated Mar 11, 2021
  • ecotag: sequences not assigned
    #96 · opened Feb 24, 2021 by Mingfei Chen
    • CLOSED
    • 1
    updated Mar 02, 2021
  • ecopcr problem
    #95 · opened Feb 23, 2021 by Mingfei Chen
    • CLOSED
    • 2
    updated Feb 24, 2021
  • Read the PR2 database
    #94 · opened Feb 21, 2021 by Celine Mercier   feature
    • 0
    updated Feb 21, 2021
  • Add a findtaxon sub command
    #93 · opened Feb 11, 2021 by Eric Coissac   feature
    • 0
    updated Feb 11, 2021
  • Problem of quoting quotes when reporting obi commands including quotes in the history
    #91 · opened Feb 11, 2021 by Eric Coissac   bug
    • 0
    updated Feb 11, 2021
  • Crash in obi less
    #88 · opened Feb 08, 2021 by Eric Coissac   bug critical
    • CLOSED
    • 0
    updated Feb 10, 2021
  • import Error
    #86 · opened Jan 22, 2021 by Mitica Ciorpac
    • CLOSED
    • 4
    updated Jan 30, 2021
  • Obi concatenate issue
    #85 · opened Aug 14, 2020 by Lotte Skovmand
    • CLOSED
    • 9
    updated Sep 09, 2020
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