"Cannot reallocate memory for fuzzy matching results"
ecoPrimers -d mito_eco -e 3 -3 2 -l 30 -L 150 -r 6231 -c > nematoda.ecoprimers
Reading taxonomy database ...Ok
Reading sequence database ...
# Reading file mito_eco_001.sdx containing 5278 sequences...
Ok
Sequence read : 117
Database is constituted of 117 examples corresponding to 117 species
and 0 counterexamples corresponding to 0 species
Total distinct species count 117
Indexing words in sequences
Filtered sequences 117/ 117 117
ok
Considered word of size 13 for filtering : 23
Primers should be at least present in 81/117 example sequences
Indexed sequences 117/ 117 : considered words 2
Strict primer count : 2
Primer sample :
+ Primer : AGCCGATTATTCTGGAAC sequence count : 115
+ Primer : TAGCCGATTATTCTGGAA sequence count : 115
Encoding sequences for fuzzy pattern matching...
Primers should be at least present in 105/117 example sequences
Primers should not be present in more than 0/0 counterexample sequences
Primers 1/2 analyzed => sequence : AGCCGATTATTCTGGAAC in 96 example and 0 counterexample sequences Primers 2/2 analyzed => sequence : TAGCCGATTATTCTGGAA in 94 example and 0 counterexample sequences
On 2 analyzed primers 0 respect quorum conditions
Conserved primers for further analysis : 0/2
Error 2 in file aproxpattern.c line 233 : Cannot reallocate memory for fuzzy matching results
Aborted
