Commit ebcaba4f by Eric Coissac

remove some warnings

parent a323fb6a
...@@ -581,7 +581,7 @@ cdef class AhoCorasick: ...@@ -581,7 +581,7 @@ cdef class AhoCorasick:
cdef size_t j cdef size_t j
cdef size_t dest cdef size_t dest
cdef dnastate* state cdef dnastate* state
cdef dnastate** table cdef dnastate** table # @DuplicatedSignature
cdef protmatch* match cdef protmatch* match
if self._finalized: if self._finalized:
...@@ -765,7 +765,7 @@ cdef class AhoCorasick: ...@@ -765,7 +765,7 @@ cdef class AhoCorasick:
cdef dict node cdef dict node
cdef dict edge cdef dict edge
cdef dnastate** table cdef dnastate** table
cdef protmatch* match cdef protmatch* match # @DuplicatedSignature
cdef size_t matchcount = 0 cdef size_t matchcount = 0
cdef size_t pnode cdef size_t pnode
...@@ -867,7 +867,7 @@ cdef class ProtAhoCorasick(AhoCorasick): ...@@ -867,7 +867,7 @@ cdef class ProtAhoCorasick(AhoCorasick):
csequence = sequence csequence = sequence
# Backtranslate according to the forward strand # Backtranslate according to the forward strand
for position in range(len(sequence)-kup+1): for position in range(len(sequence)-kup+1):
# for each peptide of size kup build a small automata with all # for each peptide of size kup build a small automata with all
......
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