Commit ebcaba4f authored by Eric Coissac's avatar Eric Coissac

remove some warnings

parent a323fb6a
......@@ -581,7 +581,7 @@ cdef class AhoCorasick:
cdef size_t j
cdef size_t dest
cdef dnastate* state
cdef dnastate** table
cdef dnastate** table # @DuplicatedSignature
cdef protmatch* match
if self._finalized:
......@@ -765,7 +765,7 @@ cdef class AhoCorasick:
cdef dict node
cdef dict edge
cdef dnastate** table
cdef protmatch* match
cdef protmatch* match # @DuplicatedSignature
cdef size_t matchcount = 0
cdef size_t pnode
......@@ -867,7 +867,7 @@ cdef class ProtAhoCorasick(AhoCorasick):
csequence = sequence
# Backtranslate according to the forward strand
for position in range(len(sequence)-kup+1):
# for each peptide of size kup build a small automata with all
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