Commit a40e9f9b by Eric Coissac

Small bugs

parent 7d969494
......@@ -34,15 +34,17 @@ def getProbes(config):
probes = {}
for s in seeds:
try:
p = fasta(s)
logger.info("Load probe sequences from file : %s" % s)
except IOError:
p = getattr(samples,s)
logger.info("Load probe internal dataset : %s" % s)
probes[s]=[p,{}]
if seeds is not None:
for s in seeds:
try:
p = fasta(s)
logger.info("Load probe sequences from file : %s" % s)
except IOError:
p = getattr(samples,s)
logger.info("Load probe internal dataset : %s" % s)
probes[s]=[p,{}]
return probes
......
......@@ -15,7 +15,7 @@ from orgasm.assembler import Assembler,tango
import sys
__title__="Build the initial assembling graph"
__title__="Build the set of seed reads"
default_config = {
......
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