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ORG.Asm
ORG.Asm
Commits
a40e6d39
Commit
a40e6d39
authored
Nov 11, 2016
by
Eric Coissac
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Suppress some eclipse warning
parent
8a6c8b59
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3 changed files
with
3 additions
and
4 deletions
+3
-4
buildgraph.py
python/orgasm/commands/buildgraph.py
+0
-1
_dynamic.pyx
python/orgasm/multialign/_dynamic.pyx
+2
-2
tango.py
python/orgasm/tango.py
+1
-1
No files found.
python/orgasm/commands/buildgraph.py
View file @
a40e6d39
...
...
@@ -13,7 +13,6 @@ from orgasm.tango import matchtoseed, cutLowCoverage, cutSNPs,\
from
orgasm.assembler
import
Assembler
,
tango
import
sys
import
os
import
os.path
...
...
python/orgasm/multialign/_dynamic.pyx
View file @
a40e6d39
...
...
@@ -228,10 +228,10 @@ cdef class EndGapFree:
self.lhSeq=len(seq)
property seqB:
def __get__(self):
def __get__(self):
# @DuplicatedSignature
return self.verticalSeq
def __set__(self, seq):
def __set__(self, seq):
# @DuplicatedSignature
self.sequenceChanged=True
self.verticalSeq=seq
self.vSeq=<char*>seq
...
...
python/orgasm/tango.py
View file @
a40e6d39
...
...
@@ -1087,7 +1087,7 @@ def path2fasta(self,assgraph,path,identifier="contig",minlink=10,nlength=20,back
:raises: :py:class:`AssertionError`
'''
frglen
,
frglensd
=
estimateFragmentLength
(
self
)
frglen
,
frglensd
=
estimateFragmentLength
(
self
)
# @UnusedVariable
#
# Build a dictionary with:
...
...
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