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ORG.Asm
ORG.Asm
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30b6f5a2
Commit
30b6f5a2
authored
Nov 05, 2016
by
Eric Coissac
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Change the rule to determine is probe sequences are proteins
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5ab4154d
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dna.pyx
python/orgasm/utils/dna.pyx
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python/orgasm/utils/dna.pyx
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30b6f5a2
...
@@ -49,7 +49,7 @@ cpdef bytes reverseComplement(bytes seq):
...
@@ -49,7 +49,7 @@ cpdef bytes reverseComplement(bytes seq):
cpdef bint isDNA(bytes seq):
cpdef bint isDNA(bytes seq):
cdef set c = set([x for x in seq.upper()])
cdef set c = set([x for x in seq.upper()])
return len(c)
=
=4
return len(c)
<
=4
cdef dict codon = {}
cdef dict codon = {}
...
...
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