Commit 2f5fe190 by Eric Coissac

Patch two small bug in the installer of the versio 0.1.2

parent e3d334b5
......@@ -7,107 +7,109 @@ Created on 13 fevr. 2014
from distutils import log
import os
from Cython.Distutils import build_ext as ori_build_ext # @UnresolvedImport
from Cython.Compiler import Options as cython_options # @UnresolvedImport
from distutils.errors import DistutilsSetupError
class build_ext(ori_build_ext):
try:
from Cython.Distutils import build_ext as ori_build_ext # @UnresolvedImport
from Cython.Compiler import Options as cython_options # @UnresolvedImport
class build_ext(ori_build_ext):
def modifyDocScripts(self):
build_dir_file=open("doc/sphinx/build_dir.txt","w")
print(self.build_lib,file=build_dir_file)
build_dir_file.close()
def initialize_options(self):
ori_build_ext.initialize_options(self) # @UndefinedVariable
self.littlebigman = None
self.built_files = None
def modifyDocScripts(self):
build_dir_file=open("doc/sphinx/build_dir.txt","w")
print(self.build_lib,file=build_dir_file)
build_dir_file.close()
def initialize_options(self):
ori_build_ext.initialize_options(self) # @UndefinedVariable
self.littlebigman = None
self.built_files = None
def finalize_options(self):
ori_build_ext.finalize_options(self) # @UndefinedVariable
self.set_undefined_options('littlebigman',
('littlebigman', 'littlebigman'))
self.set_undefined_options('build_files',
('files', 'built_files'))
self.cython_c_in_temp = 1
if self.littlebigman =='-DLITTLE_END':
if self.define is None:
self.define=[('LITTLE_END',None)]
else:
self.define.append('LITTLE_END',None)
def substitute_sources(self,exe_name,sources):
"""
Substitutes source file name starting by an @ by the actual
name of the built file (see --> build_files)
"""
sources = list(sources)
for i in range(len(sources)):
message = "%s :-> %s" % (exe_name,sources[i])
if sources[i][0]=='@':
try:
filename = self.built_files[sources[i][1:]]
except KeyError:
tmpfilename = os.path.join(self.build_temp,sources[i][1:])
if os.path.isfile (tmpfilename):
filename = tmpfilename
else:
raise DistutilsSetupError(
'The %s filename declared in the source '
'files of the program %s have not been '
'built by the installation process' % (sources[i],
exe_name))
sources[i]=filename
log.info("%s changed to %s",message,filename)
else:
log.info("%s ok",message)
return sources
def build_extensions(self):
# First, sanity-check the 'extensions' list
for ext in self.extensions:
ext.sources = self.substitute_sources(ext.name,ext.sources)
def finalize_options(self):
ori_build_ext.finalize_options(self) # @UndefinedVariable
self.set_undefined_options('littlebigman',
('littlebigman', 'littlebigman'))
self.check_extensions_list(self.extensions)
for ext in self.extensions:
log.info("%s :-> %s",ext.name,ext.sources)
ext.sources = self.cython_sources(ext.sources, ext)
self.build_extension(ext)
def run(self):
self.modifyDocScripts()
for cmd_name in self.get_sub_commands():
self.run_command(cmd_name)
cython_options.annotate = True
ori_build_ext.run(self) # @UndefinedVariable
def has_files(self):
return self.distribution.has_files()
def has_executables(self):
return self.distribution.has_executables()
self.set_undefined_options('build_files',
('files', 'built_files'))
sub_commands = [('build_files',has_files),
('build_cexe', has_executables)
] + \
ori_build_ext.sub_commands
self.cython_c_in_temp = 1
if self.littlebigman =='-DLITTLE_END':
if self.define is None:
self.define=[('LITTLE_END',None)]
else:
self.define.append('LITTLE_END',None)
def substitute_sources(self,exe_name,sources):
"""
Substitutes source file name starting by an @ by the actual
name of the built file (see --> build_files)
"""
sources = list(sources)
for i in range(len(sources)):
message = "%s :-> %s" % (exe_name,sources[i])
if sources[i][0]=='@':
try:
filename = self.built_files[sources[i][1:]]
except KeyError:
tmpfilename = os.path.join(self.build_temp,sources[i][1:])
if os.path.isfile (tmpfilename):
filename = tmpfilename
else:
raise DistutilsSetupError(
'The %s filename declared in the source '
'files of the program %s have not been '
'built by the installation process' % (sources[i],
exe_name))
sources[i]=filename
log.info("%s changed to %s",message,filename)
else:
log.info("%s ok",message)
return sources
def build_extensions(self):
# First, sanity-check the 'extensions' list
for ext in self.extensions:
ext.sources = self.substitute_sources(ext.name,ext.sources)
self.check_extensions_list(self.extensions)
for ext in self.extensions:
log.info("%s :-> %s",ext.name,ext.sources)
ext.sources = self.cython_sources(ext.sources, ext)
self.build_extension(ext)
def run(self):
self.modifyDocScripts()
for cmd_name in self.get_sub_commands():
self.run_command(cmd_name)
cython_options.annotate = True
ori_build_ext.run(self) # @UndefinedVariable
def has_files(self):
return self.distribution.has_files()
def has_executables(self):
return self.distribution.has_executables()
sub_commands = [('build_files',has_files),
('build_cexe', has_executables)
] + \
ori_build_ext.sub_commands
except ImportError:
from distutils.command import build_ext # @UnusedImport
\ No newline at end of file
......@@ -8,7 +8,7 @@ AUTHOR = 'Eric Coissac'
EMAIL = 'eric@coissac.eu'
URL = 'metabarcoding.org/obitools3'
LICENSE = 'CeCILL-V2'
DESCRIPTION ="A de novo assembler dedicated to organelle genome assembling",
DESCRIPTION ="A de novo assembler dedicated to organelle genome assembling"
SRC = 'python'
CSRC = 'src'
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment