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ORG.Asm
ORG.Asm
Commits
1a7cd206
Commit
1a7cd206
authored
Jul 03, 2016
by
Eric Coissac
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Plain Diff
changes a cdef to a cpdef
Signed-off-by:
Eric Coissac
<
eric.coissac@metabarcoding.org
>
parent
ea136ec4
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2
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2 deletions
+2
-2
python/orgasm/indexer/fakereads.pxd
python/orgasm/indexer/fakereads.pxd
+1
-1
python/orgasm/indexer/fakereads.pyx
python/orgasm/indexer/fakereads.pyx
+1
-1
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python/orgasm/indexer/fakereads.pxd
View file @
1a7cd206
...
...
@@ -27,7 +27,7 @@ cdef class FakeReads(dict):
cdef
size_t
_readsize
cdef
int
_getid
(
self
,
bytes
seq
)
cdef
bint
isFake
(
self
,
int32_t
id
)
c
p
def
bint
isFake
(
self
,
int32_t
id
)
cpdef
tuple
getReadIds
(
self
,
bytes
seq
)
cpdef
tuple
getIds
(
self
,
int32_t
id
)
cpdef
bytes
getRead
(
self
,
int32_t
readid
,
int32_t
begin
,
int32_t
length
)
...
...
python/orgasm/indexer/fakereads.pyx
View file @
1a7cd206
...
...
@@ -12,7 +12,7 @@ cdef class FakeReads(dict):
self
.
_reverse
=
{}
self
.
_keys
=
{}
cdef
bint
isFake
(
self
,
int32_t
id
):
c
p
def
bint
isFake
(
self
,
int32_t
id
):
cdef
bint
rep
=
abs
(
id
)
>=
self
.
_firstid
and
abs
(
id
)
<
self
.
_nextid
return
rep
...
...
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