Commit 6bd827ca by Eric Coissac

Change minimum length for considering a match from 1000 to 100.

parent 7a805dc6
......@@ -26,7 +26,7 @@ function lookForIR {
-query ${QUERY} \
-outfmt 6 \
-max_target_seqs 10000 | \
awk '($4 > 1000) && ($3>80) { \
awk '($4 > 100) && ($3>80) { \
SAME=(($7 < $8) && ($9 < $10)) || (($7 > $8) && ($9 > $10)); \
if ($7 < $8) \
{print substr($2,1,3),$7,$8,SAME} \
......
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