Commit 11b612fc authored by Eric Coissac's avatar Eric Coissac

Check the translation for stop codon and add a pseudogene qualifier if

parent 0eee2e07
......@@ -181,6 +181,10 @@ function Unk(s) {
QQualifier("product", Product)
QQualifier("inference", "similar to DNA sequence:" Simil)
QQualifier("inference", "org.annot -- detect pass:" PassType ":" PassInfo)
if (match(Translat,/\*/)>0) {
QQualifier("note","nonfunctional due to stop codon")
if (FrameShift==0)
QQualifier("translation", Translat)
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