Commit 7f6d3a8a by Celine Mercier

correcting paths for sumalibs submodule

parent 8bd2c05d
/*
* mtcompare.c
*
* Created on: 17 aot 2010
* Created on: 17 aot 2010
* Authors: Eric Coissac, Celine Mercier
*/
......@@ -10,10 +10,10 @@
#include <stdio.h>
#include <string.h>
#include "sumatra.h"
#include "../sumalibs/libfasta/sequence.h"
#include "../sumalibs/libutils/utilities.h"
#include "../sumalibs/liblcs/upperband.h"
#include "../sumalibs/liblcs/sse_banded_LCS_alignment.h"
#include "./sumalibs/libfasta/sequence.h"
#include "./sumalibs/libutils/utilities.h"
#include "./sumalibs/liblcs/upperband.h"
#include "./sumalibs/liblcs/sse_banded_LCS_alignment.h"
typedef struct {
......
......@@ -14,10 +14,10 @@
#include <sys/time.h>
#include "../sumalibs/libfasta/sequence.h"
#include "../sumalibs/liblcs/upperband.h"
#include "../sumalibs/liblcs/sse_banded_LCS_alignment.h"
#include "../sumalibs/libutils/utilities.h"
#include "./sumalibs/libfasta/sequence.h"
#include "./sumalibs/liblcs/upperband.h"
#include "./sumalibs/liblcs/sse_banded_LCS_alignment.h"
#include "./sumalibs/libutils/utilities.h"
#include "mtcompare_sumatra.h"
#define VERSION "1.0.02"
......
/*
* sumatra.h
*
* Created on: 8 aot 2010
* Created on: 8 aot 2010
* Author: coissac
*/
#ifndef SUMATRA_H_
#define SUMATRA_H_
#include "../sumalibs/libfasta/sequence.h"
#include "./sumalibs/libfasta/sequence.h"
void printResults(fastaSeqPtr seq1, fastaSeqPtr seq2, double score, BOOL extradata, int64_t pairs, BOOL print);
......
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