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OBITools
sumaclust
Commits
81555924
Commit
81555924
authored
Mar 27, 2019
by
Celine Mercier
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version 1.0.32: compilation with libsuma
parent
882ee2ea
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4 changed files
with
17 additions
and
41 deletions
+17
-41
Makefile
Makefile
+11
-19
global.mk
global.mk
+4
-20
sumaclust.c
sumaclust.c
+1
-1
sumalibs
sumalibs
+1
-1
No files found.
Makefile
View file @
81555924
EXEC
=
sumaclust
EXEC
=
sumaclust
SUMACLUST_SRC
=
sumaclust.c
\
mtcompare_sumaclust.c
SUMACLUST_SRC
=
sumaclust.c
\
mtcompare_sumaclust.c
SUMACLUST_OBJ
=
$
(
patsubst %.c,%.o,
$(SUMACLUST_SRC)
)
SUMACLUST_OBJ
=
$
(
patsubst %.c,%.o,
$(SUMACLUST_SRC)
)
SRCS
=
$(SUMACLUST_SRC)
SRCS
=
$(SUMACLUST_SRC)
LIB
=
-lfasta
-llcs
-lfile
-lutils
-lm
#-ll
LIB
=
-lsuma
-lm
#-ll
include
./global.mk
...
...
@@ -31,8 +28,8 @@ else
LFLAGS
=
endif
sumaclust
:
$(SUMACLUST_OBJ) $(LIB
FASTA) $(LIBLCS) $(LIBFILE) $(LIBUTILS
)
$(CC)
$(LDFLAGS)
-o
$@
$(LFLAGS)
$(SUMACLUST_OBJ)
$(LIB)
$(LIB
FASTAPATH)
$(LIBLCSPATH)
$(LIBFILEPATH)
$(LIBUTILS
PATH)
sumaclust
:
$(SUMACLUST_OBJ) $(LIB
SUMA
)
$(CC)
$(LDFLAGS)
-o
$@
$(LFLAGS)
$(SUMACLUST_OBJ)
$(LIB)
$(LIB
SUMA
PATH)
########
#
...
...
@@ -41,12 +38,7 @@ sumaclust: $(SUMACLUST_OBJ) $(LIBFASTA) $(LIBLCS) $(LIBFILE) $(LIBUTILS)
########
clean
:
rm
-f
*
.o
rm
-f
*
.P
rm
-f
$(SUMACLUST_OBJ)
rm
-f
$(EXEC)
$(MAKE)
-C
./sumalibs/libfasta clean
$(MAKE)
-C
./sumalibs/liblcs clean
$(MAKE)
-C
./sumalibs/libfile clean
$(MAKE)
-C
./sumalibs/libutils clean
$(MAKE)
-C
./sumalibs clean
global.mk
View file @
81555924
LIBFASTAPATH = -L./sumalibs/libfasta
LIBLCSPATH = -L./sumalibs/liblcs
LIBFILEPATH = -L./sumalibs/libfile
LIBUTILSPATH = -L./sumalibs/libutils
LIBSUMAPATH = -L./sumalibs
LIBFASTA = ./sumalibs/libfasta/libfasta.a
LIBLCS = ./sumalibs/liblcs/liblcs.a
LIBFILE = ./sumalibs/libfile/libfile.a
LIBUTILS = ./sumalibs/libutils/libutils.a
LIBSUMA = ./sumalibs/libsuma.a
CC=gcc
LDFLAGS=
...
...
@@ -32,14 +26,5 @@ default: all
#
########
./sumalibs/libfasta/libfasta.a:
$(MAKE) -C ./sumalibs/libfasta
./sumalibs/liblcs/liblcs.a:
$(MAKE) -C ./sumalibs/liblcs
./sumalibs/libfile/libfile.a:
$(MAKE) -C ./sumalibs/libfile
./sumalibs/libutils/libutils.a:
$(MAKE) -C ./sumalibs/libutils
\ No newline at end of file
./sumalibs/libsuma.a:
$(MAKE) -C ./sumalibs
sumaclust.c
View file @
81555924
...
...
@@ -23,7 +23,7 @@
#include "mtcompare_sumaclust.h"
#include "sumaclust.h"
#define VERSION "1.0.3
1
"
#define VERSION "1.0.3
2
"
/* ----------------------------------------------- */
...
...
sumalibs
@
ed56cb1d
Subproject commit
049129488ed96b03a5976512fe328dadeb72ace9
Subproject commit
ed56cb1d6b1e60a297cd0d1c67a4e17e4c59d202
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