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OBITools
sumaclust
Commits
2e432e83
Commit
2e432e83
authored
Mar 27, 2019
by
Celine Mercier
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Cleaner installation
parent
81555924
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4 changed files
with
22 additions
and
14 deletions
+22
-14
Makefile
Makefile
+9
-1
mtcompare_sumaclust.c
mtcompare_sumaclust.c
+4
-4
sumaclust.c
sumaclust.c
+8
-8
sumalibs
sumalibs
+1
-1
No files found.
Makefile
View file @
2e432e83
PREFIX
=
/usr/local
CFLAGS
=
-I
$(PREFIX)
/include
EXEC
=
sumaclust
SUMACLUST_SRC
=
sumaclust.c
\
...
...
@@ -41,4 +45,8 @@ clean:
rm
-f
$(SUMACLUST_OBJ)
rm
-f
$(EXEC)
$(MAKE)
-C
./sumalibs clean
install
:
all
install
-d
$(DESTDIR)$(PREFIX)
/bin/
install
-m
755
$(EXEC)
$(DESTDIR)$(PREFIX)
/bin/
mtcompare_sumaclust.c
View file @
2e432e83
...
...
@@ -15,10 +15,10 @@
#include <math.h>
#include <sys/time.h>
#include "
./sumalibs/
libfasta/sequence.h"
#include "
./sumalibs/
libutils/utilities.h"
#include "
./sumalibs/
liblcs/upperband.h"
#include "
./sumalibs/
liblcs/sse_banded_LCS_alignment.h"
#include "libfasta/sequence.h"
#include "libutils/utilities.h"
#include "liblcs/upperband.h"
#include "liblcs/sse_banded_LCS_alignment.h"
#include "sumaclust.h"
...
...
sumaclust.c
View file @
2e432e83
...
...
@@ -12,18 +12,18 @@
#include <math.h>
#include <sys/time.h>
#include "
./sumalibs/
libutils/utilities.h"
#include "
./sumalibs/
libfasta/sequence.h"
#include "
./sumalibs/
libfasta/fasta_header_parser.h"
#include "
./sumalibs/
libfasta/fasta_header_handler.h"
#include "
./sumalibs/
libfasta/fasta_seq_writer.h"
#include "
./sumalibs/
liblcs/upperband.h"
#include "
./sumalibs/
liblcs/sse_banded_LCS_alignment.h"
#include "libutils/utilities.h"
#include "libfasta/sequence.h"
#include "libfasta/fasta_header_parser.h"
#include "libfasta/fasta_header_handler.h"
#include "libfasta/fasta_seq_writer.h"
#include "liblcs/upperband.h"
#include "liblcs/sse_banded_LCS_alignment.h"
#include "mtcompare_sumaclust.h"
#include "sumaclust.h"
#define VERSION "1.0.3
2
"
#define VERSION "1.0.3
3
"
/* ----------------------------------------------- */
...
...
sumalibs
@
b11748ea
Subproject commit
ed56cb1d6b1e60a297cd0d1c67a4e17e4c59d202
Subproject commit
b11748eac8b2ff68388d44bcba577323cebe5b08
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