Commit 6c529660 by Eric Coissac

Switch back to the original python source from the paster branch

parent 46018797
......@@ -6,3 +6,5 @@ Created on 28 juillet 2017
@author: coissac
'''
from obitools3.dms.dms cimport DMS
from obitools3.utils cimport tobytes,tostr
\ No newline at end of file
......@@ -17,9 +17,6 @@ from obitools3.dms.dms import DMS
from obitools3.apps.config import getConfiguration
from obitools3.apps.config import logger
from obitools3.dms.dms cimport DMS
from obitools3.utils cimport tobytes,tostr
cpdef get_temp_dir():
"""
Returns a temporary directory object specific of this instance of obitools.
......
../../../../src/obi_lcs.h
../../../../src/obi_lcs.c
../../../../src/obierrno.h
../../../../src/obierrno.c
../../../../src/upperband.h
../../../../src/upperband.c
../../../../src/sse_banded_LCS_alignment.h
../../../../src/sse_banded_LCS_alignment.c
../../../../src/obiblob.h
../../../../src/obiblob.c
../../../../src/utils.h
../../../../src/utils.c
../../../../src/obidms.h
../../../../src/obidms.c
../../../../src/libjson/json_utils.h
../../../../src/libjson/json_utils.c
../../../../src/libjson/cJSON.h
../../../../src/libjson/cJSON.c
../../../../src/obiavl.h
../../../../src/obiavl.c
../../../../src/bloom.h
../../../../src/bloom.c
../../../../src/crc64.h
../../../../src/crc64.c
../../../../src/murmurhash2.h
../../../../src/murmurhash2.c
../../../../src/obidmscolumn.h
../../../../src/obidmscolumn.c
../../../../src/obitypes.h
../../../../src/obitypes.c
../../../../src/obidmscolumndir.h
../../../../src/obidmscolumndir.c
../../../../src/obiblob_indexer.h
../../../../src/obiblob_indexer.c
../../../../src/obiview.h
../../../../src/obiview.c
../../../../src/hashtable.h
../../../../src/hashtable.c
../../../../src/linked_list.h
../../../../src/linked_list.c
../../../../src/obidmscolumn_array.h
../../../../src/obidmscolumn_array.c
../../../../src/obidmscolumn_blob.h
../../../../src/obidmscolumn_blob.c
../../../../src/obidmscolumn_idx.h
../../../../src/obidmscolumn_idx.c
../../../../src/obidmscolumn_bool.h
../../../../src/obidmscolumn_bool.c
../../../../src/obidmscolumn_char.h
../../../../src/obidmscolumn_char.c
../../../../src/obidmscolumn_float.h
../../../../src/obidmscolumn_float.c
../../../../src/obidmscolumn_int.h
../../../../src/obidmscolumn_int.c
../../../../src/obidmscolumn_qual.h
../../../../src/obidmscolumn_qual.c
../../../../src/obidmscolumn_seq.h
../../../../src/obidmscolumn_seq.c
../../../../src/obidmscolumn_str.h
../../../../src/obidmscolumn_str.c
../../../../src/array_indexer.h
../../../../src/array_indexer.c
../../../../src/char_str_indexer.h
../../../../src/char_str_indexer.c
../../../../src/dna_seq_indexer.h
../../../../src/dna_seq_indexer.c
../../../../src/encode.c
../../../../src/encode.h
../../../../src/uint8_indexer.c
../../../../src/uint8_indexer.h
../../../../src/build_reference_db.c
../../../../src/build_reference_db.h
../../../../src/kmer_similarity.c
../../../../src/kmer_similarity.h
../../../../src/obi_clean.c
../../../../src/obi_clean.h
../../../../src/obi_ecopcr.c
../../../../src/obi_ecopcr.h
../../../../src/obi_ecotag.c
../../../../src/obi_ecotag.h
../../../../src/obidms_taxonomy.c
../../../../src/obidms_taxonomy.h
../../../../src/obilittlebigman.c
../../../../src/obilittlebigman.h
../../../../src/_sse.h
../../../../src/obidebug.h
../../../../src/libecoPCR/libapat/CODES/dft_code.h
../../../../src/libecoPCR/libapat/CODES/dna_code.h
../../../../src/libecoPCR/libapat/CODES/prot_code.h
../../../../src/libecoPCR/libapat/apat_parse.c
../../../../src/libecoPCR/libapat/apat_search.c
../../../../src/libecoPCR/libapat/apat.h
../../../../src/libecoPCR/libapat/Gmach.h
../../../../src/libecoPCR/libapat/Gtypes.h
../../../../src/libecoPCR/libapat/libstki.c
../../../../src/libecoPCR/libapat/libstki.h
../../../../src/libecoPCR/libthermo/nnparams.h
../../../../src/libecoPCR/libthermo/nnparams.c
../../../../src/libecoPCR/ecoapat.c
../../../../src/libecoPCR/ecodna.c
../../../../src/libecoPCR/ecoError.c
../../../../src/libecoPCR/ecoMalloc.c
../../../../src/libecoPCR/ecoPCR.h
#cython: language_level=3
from obitools3.dms.capi.obitypes cimport index_t, \
name_data_type, \
obitype_t, \
obiversion_t, \
OBI_QUAL
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_header_p, \
obi_close_column, \
obi_get_elements_names, \
obi_column_write_comments
from ..capi.obitypes cimport index_t, \
obitype_t
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_p
from ..capi.obidmscolumn cimport OBIDMS_column_p
from obitools3.dms.view.view cimport View
from ..view.view cimport View
from obitools3.dms.object cimport OBIWrapper
from ..object cimport OBIWrapper
cdef dict __OBIDMS_COLUMN_CLASS__
......
......@@ -3,31 +3,27 @@
__OBIDMS_COLUMN_CLASS__ = {}
from obitools3.dms.object cimport OBIWrapper
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_p
from obitools3.dms.capi.obitypes cimport index_t, \
name_data_type, \
obitype_t, \
obiversion_t, \
OBI_QUAL
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_header_p, \
from ..capi.obitypes cimport name_data_type, \
obitype_t, \
obiversion_t, \
OBI_QUAL
from ..capi.obidms cimport obi_import_column
from ..capi.obidmscolumn cimport OBIDMS_column_header_p, \
obi_close_column, \
obi_get_elements_names, \
obi_column_write_comments
from obitools3.dms.capi.obidms cimport obi_import_column
from obitools3.dms.view.view cimport View
from obitools3.dms.capi.obiutils cimport obi_format_date
from ..capi.obiutils cimport obi_format_date
from obitools3.dms.capi.obiview cimport obi_view_add_column, \
from ..capi.obiview cimport obi_view_add_column, \
obi_view_get_pointer_on_column_in_view, \
Obiview_p, \
NUC_SEQUENCE_COLUMN
from obitools3.dms.object cimport OBIDeactivatedInstanceError
from ..object cimport OBIDeactivatedInstanceError
from obitools3.utils cimport tobytes, \
bytes2str, \
......
../../../../src/obi_lcs.h
../../../../src/obi_lcs.c
../../../../src/obierrno.h
../../../../src/obierrno.c
../../../../src/upperband.h
../../../../src/upperband.c
../../../../src/sse_banded_LCS_alignment.h
../../../../src/sse_banded_LCS_alignment.c
../../../../src/obiblob.h
../../../../src/obiblob.c
../../../../src/utils.h
../../../../src/utils.c
../../../../src/obidms.h
../../../../src/obidms.c
../../../../src/libjson/json_utils.h
../../../../src/libjson/json_utils.c
../../../../src/libjson/cJSON.h
../../../../src/libjson/cJSON.c
../../../../src/obiavl.h
../../../../src/obiavl.c
../../../../src/bloom.h
../../../../src/bloom.c
../../../../src/crc64.h
../../../../src/crc64.c
../../../../src/murmurhash2.h
../../../../src/murmurhash2.c
../../../../src/obidmscolumn.h
../../../../src/obidmscolumn.c
../../../../src/obitypes.h
../../../../src/obitypes.c
../../../../src/obidmscolumndir.h
../../../../src/obidmscolumndir.c
../../../../src/obiblob_indexer.h
../../../../src/obiblob_indexer.c
../../../../src/obiview.h
../../../../src/obiview.c
../../../../src/hashtable.h
../../../../src/hashtable.c
../../../../src/linked_list.h
../../../../src/linked_list.c
../../../../src/obidmscolumn_array.h
../../../../src/obidmscolumn_array.c
../../../../src/obidmscolumn_blob.h
../../../../src/obidmscolumn_blob.c
../../../../src/obidmscolumn_idx.h
../../../../src/obidmscolumn_idx.c
../../../../src/obidmscolumn_bool.h
../../../../src/obidmscolumn_bool.c
../../../../src/obidmscolumn_char.h
../../../../src/obidmscolumn_char.c
../../../../src/obidmscolumn_float.h
../../../../src/obidmscolumn_float.c
../../../../src/obidmscolumn_int.h
../../../../src/obidmscolumn_int.c
../../../../src/obidmscolumn_qual.h
../../../../src/obidmscolumn_qual.c
../../../../src/obidmscolumn_seq.h
../../../../src/obidmscolumn_seq.c
../../../../src/obidmscolumn_str.h
../../../../src/obidmscolumn_str.c
../../../../src/array_indexer.h
../../../../src/array_indexer.c
../../../../src/char_str_indexer.h
../../../../src/char_str_indexer.c
../../../../src/dna_seq_indexer.h
../../../../src/dna_seq_indexer.c
../../../../src/encode.c
../../../../src/encode.h
../../../../src/uint8_indexer.c
../../../../src/uint8_indexer.h
../../../../src/build_reference_db.c
../../../../src/build_reference_db.h
../../../../src/kmer_similarity.c
../../../../src/kmer_similarity.h
../../../../src/obi_clean.c
../../../../src/obi_clean.h
../../../../src/obi_ecopcr.c
../../../../src/obi_ecopcr.h
../../../../src/obi_ecotag.c
../../../../src/obi_ecotag.h
../../../../src/obidms_taxonomy.c
../../../../src/obidms_taxonomy.h
../../../../src/obilittlebigman.c
../../../../src/obilittlebigman.h
../../../../src/_sse.h
../../../../src/obidebug.h
../../../../src/libecoPCR/libapat/CODES/dft_code.h
../../../../src/libecoPCR/libapat/CODES/dna_code.h
../../../../src/libecoPCR/libapat/CODES/prot_code.h
../../../../src/libecoPCR/libapat/apat_parse.c
../../../../src/libecoPCR/libapat/apat_search.c
../../../../src/libecoPCR/libapat/apat.h
../../../../src/libecoPCR/libapat/Gmach.h
../../../../src/libecoPCR/libapat/Gtypes.h
../../../../src/libecoPCR/libapat/libstki.c
../../../../src/libecoPCR/libapat/libstki.h
../../../../src/libecoPCR/libthermo/nnparams.h
../../../../src/libecoPCR/libthermo/nnparams.c
../../../../src/libecoPCR/ecoapat.c
../../../../src/libecoPCR/ecodna.c
../../../../src/libecoPCR/ecoError.c
../../../../src/libecoPCR/ecoMalloc.c
../../../../src/libecoPCR/ecoPCR.h
# #cython: language_level=3
from obitools3.dms.capi.obitypes cimport index_t
from obitools3.dms.column.column cimport Column, \
Column_multi_elts
from ..capi.obitypes cimport index_t
from .column cimport Column, \
Column_multi_elts
cdef class Column_idx(Column) :
......
......@@ -2,26 +2,23 @@
from obitools3.dms.capi.obierrno cimport obi_errno
from obitools3.dms.view.view cimport View
from ..view.view cimport View
from obitools3.utils cimport tobytes, \
obi_errno_to_exception
from obitools3.dms.capi.obiview cimport obi_get_index_with_elt_name_and_col_p_in_view, \
from ..capi.obiview cimport obi_get_index_with_elt_name_and_col_p_in_view, \
obi_get_index_with_elt_idx_and_col_p_in_view, \
obi_set_index_with_elt_name_and_col_p_in_view, \
obi_set_index_with_elt_idx_and_col_p_in_view, \
Obiview_p
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_p
from ..capi.obidmscolumn cimport OBIDMS_column_p
from obitools3.dms.capi.obitypes cimport OBI_IDX, OBIIdx_NA, index_t
from ..capi.obitypes cimport OBI_IDX, OBIIdx_NA, index_t
from cpython.long cimport PyLong_FromLongLong
from obitools3.dms.column.column cimport Column, \
Column_multi_elts
# TODO overwrite other functions from Column and Column_multi_elts
......
../../../../../src/obi_lcs.h
../../../../../src/obi_lcs.c
../../../../../src/obierrno.h
../../../../../src/obierrno.c
../../../../../src/upperband.h
../../../../../src/upperband.c
../../../../../src/sse_banded_LCS_alignment.h
../../../../../src/sse_banded_LCS_alignment.c
../../../../../src/obiblob.h
../../../../../src/obiblob.c
../../../../../src/utils.h
../../../../../src/utils.c
../../../../../src/obidms.h
../../../../../src/obidms.c
../../../../../src/libjson/json_utils.h
../../../../../src/libjson/json_utils.c
../../../../../src/libjson/cJSON.h
../../../../../src/libjson/cJSON.c
../../../../../src/obiavl.h
../../../../../src/obiavl.c
../../../../../src/bloom.h
../../../../../src/bloom.c
../../../../../src/crc64.h
../../../../../src/crc64.c
../../../../../src/murmurhash2.h
../../../../../src/murmurhash2.c
../../../../../src/obidmscolumn.h
../../../../../src/obidmscolumn.c
../../../../../src/obitypes.h
../../../../../src/obitypes.c
../../../../../src/obidmscolumndir.h
../../../../../src/obidmscolumndir.c
../../../../../src/obiblob_indexer.h
../../../../../src/obiblob_indexer.c
../../../../../src/obiview.h
../../../../../src/obiview.c
../../../../../src/hashtable.h
../../../../../src/hashtable.c
../../../../../src/linked_list.h
../../../../../src/linked_list.c
../../../../../src/obidmscolumn_array.h
../../../../../src/obidmscolumn_array.c
../../../../../src/obidmscolumn_blob.h
../../../../../src/obidmscolumn_blob.c
../../../../../src/obidmscolumn_idx.h
../../../../../src/obidmscolumn_idx.c
../../../../../src/obidmscolumn_bool.h
../../../../../src/obidmscolumn_bool.c
../../../../../src/obidmscolumn_char.h
../../../../../src/obidmscolumn_char.c
../../../../../src/obidmscolumn_float.h
../../../../../src/obidmscolumn_float.c
../../../../../src/obidmscolumn_int.h
../../../../../src/obidmscolumn_int.c
../../../../../src/obidmscolumn_qual.h
../../../../../src/obidmscolumn_qual.c
../../../../../src/obidmscolumn_seq.h
../../../../../src/obidmscolumn_seq.c
../../../../../src/obidmscolumn_str.h
../../../../../src/obidmscolumn_str.c
../../../../../src/array_indexer.h
../../../../../src/array_indexer.c
../../../../../src/char_str_indexer.h
../../../../../src/char_str_indexer.c
../../../../../src/dna_seq_indexer.h
../../../../../src/dna_seq_indexer.c
../../../../../src/encode.c
../../../../../src/encode.h
../../../../../src/uint8_indexer.c
../../../../../src/uint8_indexer.h
../../../../../src/build_reference_db.c
../../../../../src/build_reference_db.h
../../../../../src/kmer_similarity.c
../../../../../src/kmer_similarity.h
../../../../../src/obi_clean.c
../../../../../src/obi_clean.h
../../../../../src/obi_ecopcr.c
../../../../../src/obi_ecopcr.h
../../../../../src/obi_ecotag.c
../../../../../src/obi_ecotag.h
../../../../../src/obidms_taxonomy.c
../../../../../src/obidms_taxonomy.h
../../../../../src/obilittlebigman.c
../../../../../src/obilittlebigman.h
../../../../../src/_sse.h
../../../../../src/obidebug.h
../../../../../src/libecoPCR/libapat/CODES/dft_code.h
../../../../../src/libecoPCR/libapat/CODES/dna_code.h
../../../../../src/libecoPCR/libapat/CODES/prot_code.h
../../../../../src/libecoPCR/libapat/apat_parse.c
../../../../../src/libecoPCR/libapat/apat_search.c
../../../../../src/libecoPCR/libapat/apat.h
../../../../../src/libecoPCR/libapat/Gmach.h
../../../../../src/libecoPCR/libapat/Gtypes.h
../../../../../src/libecoPCR/libapat/libstki.c
../../../../../src/libecoPCR/libapat/libstki.h
../../../../../src/libecoPCR/libthermo/nnparams.h
../../../../../src/libecoPCR/libthermo/nnparams.c
../../../../../src/libecoPCR/ecoapat.c
../../../../../src/libecoPCR/ecodna.c
../../../../../src/libecoPCR/ecoError.c
../../../../../src/libecoPCR/ecoMalloc.c
../../../../../src/libecoPCR/ecoPCR.h
# #cython: language_level=3
from obitools3.dms.capi.obitypes cimport index_t
from ...capi.obitypes cimport index_t
from obitools3.dms.column.column cimport Column, \
from ..column cimport Column, \
Column_multi_elts
......
......@@ -2,20 +2,14 @@
from obitools3.dms.capi.obierrno cimport obi_errno
from obitools3.dms.column.column cimport Column, \
Column_multi_elts
from ..column cimport register_column_class
from obitools3.dms.capi.obitypes cimport index_t
from obitools3.dms.column.column cimport register_column_class
from obitools3.dms.view.view cimport View
from ...view.view cimport View
from obitools3.utils cimport tobytes, \
obi_errno_to_exception
from obitools3.dms.capi.obiview cimport obi_get_bool_with_elt_name_and_col_p_in_view, \
from ...capi.obiview cimport obi_get_bool_with_elt_name_and_col_p_in_view, \
obi_get_bool_with_elt_idx_and_col_p_in_view, \
obi_set_bool_with_elt_name_and_col_p_in_view, \
obi_set_bool_with_elt_idx_and_col_p_in_view, \
......@@ -23,9 +17,9 @@ from obitools3.dms.capi.obiview cimport obi_get_bool_with_elt_name_and_col_p_in_
obi_set_array_with_col_p_in_view, \
Obiview_p
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_p
from ...capi.obidmscolumn cimport OBIDMS_column_p
from obitools3.dms.capi.obitypes cimport OBI_BOOL, \
from ...capi.obitypes cimport OBI_BOOL, \
OBIBool_NA, \
OBITuple_NA, \
obibool_t
......
../../../../../src/obi_lcs.h
../../../../../src/obi_lcs.c
../../../../../src/obierrno.h
../../../../../src/obierrno.c
../../../../../src/upperband.h
../../../../../src/upperband.c
../../../../../src/sse_banded_LCS_alignment.h
../../../../../src/sse_banded_LCS_alignment.c
../../../../../src/obiblob.h
../../../../../src/obiblob.c
../../../../../src/utils.h
../../../../../src/utils.c
../../../../../src/obidms.h
../../../../../src/obidms.c
../../../../../src/libjson/json_utils.h
../../../../../src/libjson/json_utils.c
../../../../../src/libjson/cJSON.h
../../../../../src/libjson/cJSON.c
../../../../../src/obiavl.h
../../../../../src/obiavl.c
../../../../../src/bloom.h
../../../../../src/bloom.c
../../../../../src/crc64.h
../../../../../src/crc64.c
../../../../../src/murmurhash2.h
../../../../../src/murmurhash2.c
../../../../../src/obidmscolumn.h
../../../../../src/obidmscolumn.c
../../../../../src/obitypes.h
../../../../../src/obitypes.c
../../../../../src/obidmscolumndir.h
../../../../../src/obidmscolumndir.c
../../../../../src/obiblob_indexer.h
../../../../../src/obiblob_indexer.c
../../../../../src/obiview.h
../../../../../src/obiview.c
../../../../../src/hashtable.h
../../../../../src/hashtable.c
../../../../../src/linked_list.h
../../../../../src/linked_list.c
../../../../../src/obidmscolumn_array.h
../../../../../src/obidmscolumn_array.c
../../../../../src/obidmscolumn_blob.h
../../../../../src/obidmscolumn_blob.c
../../../../../src/obidmscolumn_idx.h
../../../../../src/obidmscolumn_idx.c
../../../../../src/obidmscolumn_bool.h
../../../../../src/obidmscolumn_bool.c
../../../../../src/obidmscolumn_char.h
../../../../../src/obidmscolumn_char.c
../../../../../src/obidmscolumn_float.h
../../../../../src/obidmscolumn_float.c
../../../../../src/obidmscolumn_int.h
../../../../../src/obidmscolumn_int.c
../../../../../src/obidmscolumn_qual.h
../../../../../src/obidmscolumn_qual.c
../../../../../src/obidmscolumn_seq.h
../../../../../src/obidmscolumn_seq.c
../../../../../src/obidmscolumn_str.h
../../../../../src/obidmscolumn_str.c
../../../../../src/array_indexer.h
../../../../../src/array_indexer.c
../../../../../src/char_str_indexer.h
../../../../../src/char_str_indexer.c
../../../../../src/dna_seq_indexer.h
../../../../../src/dna_seq_indexer.c
../../../../../src/encode.c
../../../../../src/encode.h
../../../../../src/uint8_indexer.c
../../../../../src/uint8_indexer.h
../../../../../src/build_reference_db.c
../../../../../src/build_reference_db.h
../../../../../src/kmer_similarity.c
../../../../../src/kmer_similarity.h
../../../../../src/obi_clean.c
../../../../../src/obi_clean.h
../../../../../src/obi_ecopcr.c
../../../../../src/obi_ecopcr.h
../../../../../src/obi_ecotag.c
../../../../../src/obi_ecotag.h
../../../../../src/obidms_taxonomy.c
../../../../../src/obidms_taxonomy.h
../../../../../src/obilittlebigman.c
../../../../../src/obilittlebigman.h
../../../../../src/_sse.h
../../../../../src/obidebug.h
../../../../../src/libecoPCR/libapat/CODES/dft_code.h
../../../../../src/libecoPCR/libapat/CODES/dna_code.h
../../../../../src/libecoPCR/libapat/CODES/prot_code.h
../../../../../src/libecoPCR/libapat/apat_parse.c
../../../../../src/libecoPCR/libapat/apat_search.c
../../../../../src/libecoPCR/libapat/apat.h
../../../../../src/libecoPCR/libapat/Gmach.h
../../../../../src/libecoPCR/libapat/Gtypes.h
../../../../../src/libecoPCR/libapat/libstki.c
../../../../../src/libecoPCR/libapat/libstki.h
../../../../../src/libecoPCR/libthermo/nnparams.h
../../../../../src/libecoPCR/libthermo/nnparams.c
../../../../../src/libecoPCR/ecoapat.c
../../../../../src/libecoPCR/ecodna.c
../../../../../src/libecoPCR/ecoError.c
../../../../../src/libecoPCR/ecoMalloc.c
../../../../../src/libecoPCR/ecoPCR.h
# #cython: language_level=3
from obitools3.dms.capi.obitypes cimport index_t
from ...capi.obitypes cimport index_t
from obitools3.dms.column.column cimport Column, \
from ..column cimport Column, \
Column_multi_elts
......
#cython: language_level=3
from obitools3.dms.capi.obierrno cimport obi_errno
from obitools3.dms.capi.obitypes cimport index_t
from obitools3.dms.column.column cimport Column, \
Column_multi_elts
from ..column cimport register_column_class
from obitools3.dms.column.column cimport register_column_class
from obitools3.dms.view.view cimport View
from ...view.view cimport View
from obitools3.utils cimport tobytes, \
obi_errno_to_exception
from obitools3.dms.capi.obiview cimport obi_get_char_with_elt_name_and_col_p_in_view, \
from ...capi.obiview cimport obi_get_char_with_elt_name_and_col_p_in_view, \
obi_get_char_with_elt_idx_and_col_p_in_view, \
obi_set_char_with_elt_name_and_col_p_in_view, \
obi_set_char_with_elt_idx_and_col_p_in_view, \
......@@ -22,9 +17,9 @@ from obitools3.dms.capi.obiview cimport obi_get_char_with_elt_name_and_col_p_in_
obi_set_array_with_col_p_in_view, \
Obiview_p
from obitools3.dms.capi.obidmscolumn cimport OBIDMS_column_p
from ...capi.obidmscolumn cimport OBIDMS_column_p
from obitools3.dms.capi.obitypes cimport OBI_CHAR, \
from ...capi.obitypes cimport OBI_CHAR, \
OBIChar_NA, \
OBITuple_NA, \
obichar_t
......@@ -121,7 +116,7 @@ cdef class Column_multi_elts_char(Column_multi_elts):
cpdef set_item(self, index_t line_nb, object elt_id, object value) :
global obi_errno
cdef bytes elt_name
cdef bytes elt_name
cdef obichar_t value_b
if value is None :
value_b = OBIChar_NA
......
../../../../../src/obi_lcs.h
../../../../../src/obi_lcs.c
../../../../../src/obierrno.h
../../../../../src/obierrno.c
../../../../../src/upperband.h
../../../../../src/upperband.c
../../../../../src/sse_banded_LCS_alignment.h
../../../../../src/sse_banded_LCS_alignment.c
../../../../../src/obiblob.h
../../../../../src/obiblob.c
../../../../../src/utils.h
../../../../../src/utils.c
../../../../../src/obidms.h
../../../../../src/obidms.c
../../../../../src/libjson/json_utils.h
../../../../../src/libjson/json_utils.c
../../../../../src/libjson/cJSON.h
../../../../../src/libjson/cJSON.c
../../../../../src/obiavl.h
../../../../../src/obiavl.c
../../../../../src/bloom.h
../../../../../src/bloom.c
../../../../../src/crc64.h
../../../../../src/crc64.c
../../../../../src/murmurhash2.h
../../../../../src/murmurhash2.c
../../../../../src/obidmscolumn.h
../../../../../src/obidmscolumn.c
../../../../../src/obitypes.h
../../../../../src/obitypes.c
../../../../../src/obidmscolumndir.h
../../../../../src/obidmscolumndir.c
../../../../../src/obiblob_indexer.h
../../../../../src/obiblob_indexer.c
../../../../../src/obiview.h
../../../../../src/obiview.c
../../../../../src/hashtable.h
../../../../../src/hashtable.c
../../../../../src/linked_list.h
../../../../../src/linked_list.c
../../../../../src/obidmscolumn_array.h
../../../../../src/obidmscolumn_array.c
../../../../../src/obidmscolumn_blob.h
../../../../../src/obidmscolumn_blob.c
../../../../../src/obidmscolumn_idx.h
../../../../../src/obidmscolumn_idx.c
../../../../../src/obidmscolumn_bool.h
../../../../../src/obidmscolumn_bool.c
../../../../../src/obidmscolumn_char.h
../../../../../src/obidmscolumn_char.c
../../../../../src/obidmscolumn_float.h