... | @@ -140,7 +140,7 @@ For EMBL files, you can give the path to a directory with several EMBL files. |
... | @@ -140,7 +140,7 @@ For EMBL files, you can give the path to a directory with several EMBL files. |
|
obi grep --require-rank=family --taxonomy wolf/taxonomy/my_tax wolf/v05_refs_uniq wolf/v05_refs_uniq_clean
|
|
obi grep --require-rank=family --taxonomy wolf/taxonomy/my_tax wolf/v05_refs_uniq wolf/v05_refs_uniq_clean
|
|
|
|
|
|
|
|
|
|
4. Build the reference database specifically used by the OBITools3 to make ecotag efficient:
|
|
4. Build the reference database specifically used by the OBITools3 to make ecotag efficient by pre-computing the similarities between the reference sequences:
|
|
|
|
|
|
obi build_ref_db -t 0.97 --taxonomy wolf/taxonomy/my_tax wolf/v05_refs_uniq_clean wolf/v05_db_97
|
|
obi build_ref_db -t 0.97 --taxonomy wolf/taxonomy/my_tax wolf/v05_refs_uniq_clean wolf/v05_db_97
|
|
|
|
|
... | | ... | |