... | @@ -106,7 +106,7 @@ Otherwise, to build the database yourself from the start: |
... | @@ -106,7 +106,7 @@ Otherwise, to build the database yourself from the start: |
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mkdir EMBL
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mkdir EMBL
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cd EMBL
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cd EMBL
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wget -nH --cut-dirs=5 -A rel_std_*.dat.gz -R rel_std_hum_*.dat.gz,rel_std_env_*.dat.gz -m ftp://ftp.ebi.ac.uk/pub/databases/embl/release/std/
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wget -nH --cut-dirs=5 -A rel_std_*.dat.gz -R rel_std_hum_*.dat.gz,rel_std_env_*.dat.gz -m https://ftp.ebi.ac.uk/pub/databases/embl/release/std/
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cd ..
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cd ..
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2. Import the sequences in the DMS:
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2. Import the sequences in the DMS:
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... | @@ -119,7 +119,7 @@ For EMBL files, you can give the path to a directory with several EMBL files. |
... | @@ -119,7 +119,7 @@ For EMBL files, you can give the path to a directory with several EMBL files. |
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3. Download the taxonomy:
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3. Download the taxonomy:
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wget ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz
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wget https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz
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4. Import the taxonomy in the DMS:
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4. Import the taxonomy in the DMS:
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... | | ... | |