3.0.0-beta11
Current version: You can check the version installed by running obi --version
Release notes:
-
3.0.0-beta11
: Fixed a bug in obi cat when concatenating views with columns having different key sets, and a bug in obi ecotag generating badly formatted column comments. -
3.0.0-beta10
: obi import: new option --preread to do a first readthrough of the dataset if it contains huge dictionaries for a much faster import. -
3.0.0-beta9
: Better disk space management when importing files (rewritten columns are deleted). -
3.0.0-beta8
: Fixed a bug when importing a file where the first entry would contain a dictionary with a single key. -
3.0.0-beta7
: Added the 'obi' prefix in the bash history commands, and fixed a compilation issue with some versions of gcc. -
3.0.0-beta6
: New command: obi cat to concatenate views, and various inconsequential fixes. -
3.0.0-beta5
: Fixed a bug in ngsfilter when there is only one tag. -
3.0.0-beta4
: Fixed and improved the options to keep nucleotides around the amplicon in ecopcr. -
3.0.0-beta3
: Fixed bugs in ngsfilter when cutting sequences, and a few minor bugs.
How to update with git:
From the OBITools3 installation directory and virtual environment, run:
git pull
python3 setup.py install