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### Release notes:
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* `3.0.0b28`:
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- all commands: now handle output to `stdout` (use `-` as output URI)
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- all commands: now handle output to standard output (use `-` as output URI)
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- `ngsfilter`: unidentified sequences are now kept untrimmed
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- `alignpairedend`: improved/fixed the output tags for the alignment score and lengths
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- `grep`: now prints the number of entries grepped
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