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  • Installing the OBITools3

Last edited by Celine Mercier Apr 06, 2022
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Installing the OBITools3

Installing the OBITools3

The OBITools3 are now available to download from git, and will soon be on Nix (pull request).

Requirements: python3, python3-venv, git, CMake

Then you can do:

	git clone https://git.metabarcoding.org/obitools/obitools3.git
	cd obitools3
	python3 -m venv obi3-env
	. obi3-env/bin/activate
	pip install cython
	python3 setup.py install
	. obi_completion_script.sh

And test the installation with:

	obi test
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  • Installing the OBITools3
  • The OBITools3 data structure
  • The OBITools3 syntax
  • Updating and release notes
  • Wolf tutorial with the OBITools3
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