Commits · d3a6ff604344c347c9331a34792886e4430d0028 · OBITools / OBITools3 · GitLab

26 Apr, 2016 1 commit
- Removed deprecated code · d3a6ff60
  Celine Mercier authored Apr 26, 2016
  
  d3a6ff60
25 Apr, 2016 11 commits
- Merge branch 'master' of git@git.metabarcoding.org:obitools/obitools3.git · 5ca84b91
  Celine Mercier authored Apr 25, 2016
  
  5ca84b91
- Fixed all compilation problems with new function names, locations etc · 87935c66
  Celine Mercier authored Apr 25, 2016
  
  87935c66
- Made the function to clone a column in the context of a view private · 92980508
  Celine Mercier authored Apr 25, 2016
  
  92980508
- Made function to update the line count of a view private · 65880db4
  Celine Mercier authored Apr 25, 2016
  
  65880db4
- Reordered view functions for better coherence · 767d9c78
  Celine Mercier authored Apr 25, 2016
  
  767d9c78
- Updated the documentation for utils functions · 2566377e
  Celine Mercier authored Apr 25, 2016
  
  2566377e
- Updated obiversion_t declaration · 1fbbdd43
  Celine Mercier authored Apr 25, 2016
  
  1fbbdd43
- Documentation for views and reworked the code a little · 8cdfbb37
  Celine Mercier authored Apr 25, 2016
  
  8cdfbb37
- Reworked obiview code and added more comments · 0a55e265
  Celine Mercier authored Apr 25, 2016
  
  0a55e265
- Updated documentation in obitypes.h · 68a8509c
  Celine Mercier authored Apr 25, 2016
  
  68a8509c
- Fixed the calculation of the size of data for OBI_STR and OBI_SEQ · 5f98d2ed
  Celine Mercier authored Apr 25, 2016
```
columns
```
  5f98d2ed
23 Apr, 2016 2 commits
- Update Licence to english version · ef1be141
  Eric Coissac authored Apr 23, 2016
  
  ef1be141
- Add license · bbfd40d5
  Eric Coissac authored Apr 23, 2016
  
  bbfd40d5
22 Apr, 2016 14 commits
- Updated the documentation in obidmscolumn.h · 5d08da46
  Celine Mercier authored Apr 22, 2016
  
  5d08da46
- Creating a column now uses the function to create the indexer name if · 66045acf
  Celine Mercier authored Apr 22, 2016
```
one was not provided
```
  66045acf
- Improved function to build an indexer name · 6977c431
  Celine Mercier authored Apr 22, 2016
  
  6977c431
- Added a function to build indexer names · 839b3000
  Celine Mercier authored Apr 22, 2016
  
  839b3000
- changed MAP_PRIVATE flags to MAP_SHARED when opening a column because it · ffa45579
  Celine Mercier authored Apr 22, 2016
```
seems a lot more efficient
```
  ffa45579
- Fixed initialization of NA values for OBI_STR and OBI_SEQ columns · 003cd113
  Celine Mercier authored Apr 22, 2016
  
  003cd113
- Uncommented an error message that doesn't need to be commented anymore · c87227b6
  Celine Mercier authored Apr 22, 2016
  
  c87227b6
- Updated the documentation for OBI_STR columns · c07e75f2
  Celine Mercier authored Apr 22, 2016
  
  c07e75f2
- Updated the documentation for OBI_SEQ columns · 6b394a5c
  Celine Mercier authored Apr 22, 2016
  
  6b394a5c
- Deleted more unused inclusions in OBI_STR and OBI_SEQ column types code · 2416b8cc
  Celine Mercier authored Apr 22, 2016
  
  2416b8cc
- Removed unused inclusions and definitions in all column types code · b9921e11
  Celine Mercier authored Apr 22, 2016
  
  b9921e11
- Removed unused definition in OBI_IDX columns code · 8f5aa884
  Celine Mercier authored Apr 22, 2016
  
  8f5aa884
- Updated the documentation for columns with the type OBI_IDX · 900d67de
  Celine Mercier authored Apr 22, 2016
  
  900d67de
- Updated the documentation for obidms functions · 22e3c3ee
  Celine Mercier authored Apr 22, 2016
  
  22e3c3ee
21 Apr, 2016 12 commits
- Finished moving obiblob functions to obiblob files and documentation for · 4ead37ee
  Celine Mercier authored Apr 21, 2016
```
obiblob functions
```
  4ead37ee
- Documentation for obiblob indexer API · bce360bb
  Celine Mercier authored Apr 21, 2016
  
  bce360bb
- Improved AVL tree documentation · 2a68cb26
  Celine Mercier authored Apr 21, 2016
  
  2a68cb26
- Updated AVL documentation · 043e70ff
  Celine Mercier authored Apr 21, 2016
  
  043e70ff
- Moved some blob functions to obiblob.c · 66021367
  Celine Mercier authored Apr 21, 2016
  
  66021367
- Little annotations for the murmur hash function. · e69f44ae
  Celine Mercier authored Apr 21, 2016
  
  e69f44ae
- Updated encode functions documentation · 1941a378
  Celine Mercier authored Apr 21, 2016
  
  1941a378
- Replaced malloc+memset with calloc · c7b8db6a
  Celine Mercier authored Apr 21, 2016
  
  c7b8db6a
- Documentation for DNA sequence indexing functions · 1dc4a3be
  Celine Mercier authored Apr 21, 2016
  
  1dc4a3be
- Short doc for crc function · 09597016
  Celine Mercier authored Apr 21, 2016
  
  09597016
- Documented the functions indexing and retrieving character strings · 1a2fa092
  Celine Mercier authored Apr 21, 2016
  
  1a2fa092
- Documented changes made in bloom functions · 00f2f2cc
  Celine Mercier authored Apr 21, 2016
  
  00f2f2cc