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OBITools
OBITools3
Commits
baba2d74
Commit
baba2d74
authored
Apr 29, 2016
by
Celine Mercier
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commenting _obidms.pyx
parent
5bd12079
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python/obitools3/obidms/_obidms.pyx
python/obitools3/obidms/_obidms.pyx
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python/obitools3/obidms/_obidms.pyx
View file @
baba2d74
...
...
@@ -607,7 +607,7 @@ cdef class OBIView_line :
elif
value_type
==
bool
:
value_obitype
=
'OBI_BOOL'
elif
value_type
==
str
:
if
only_ATGC
(
str2bytes
(
value
))
:
# TODO
if
only_ATGC
(
str2bytes
(
value
))
:
# TODO
detect IUPAC?
value_obitype
=
'OBI_SEQ'
elif
len
(
value
)
==
1
:
value_obitype
=
'OBI_CHAR'
...
...
@@ -718,7 +718,7 @@ cdef class OBIDMS :
views
[
view_name
][
"line_count"
]
=
<
int
>
view_p
.
line_count
views
[
view_name
][
"view_number"
]
=
<
int
>
view_p
.
view_number
views
[
view_name
][
"created_from"
]
=
bytes2str
(
view_p
.
created_from
)
views
[
view_name
][
"creation_date"
]
=
bytes2str
(
obi_format_date
(
view_p
.
creation_date
))
# TODO move this function in utils or somethings
views
[
view_name
][
"creation_date"
]
=
bytes2str
(
obi_format_date
(
view_p
.
creation_date
))
if
(
view_p
.
all_lines
)
:
views
[
view_name
][
"line_selection"
]
=
None
else
:
...
...
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