Added check to prevent views from having the name 'taxonomy' (used for

URIs)

src/obiview.c

@@ -1558,6 +1558,14 @@ Obiview_p obi_new_view(OBIDMS_p dms, const char* view_name, Obiview_p view_to_cl
 		return NULL;
 	}
 
+	// Check that the view name is not 'taxonomy' (used for URIs)
+	if (strcmp(view_name, "taxonomy") == 0)
+	{
+		obi_set_errno(OBIVIEW_ERROR);
+		obidebug(1, "\nView name can not be 'taxonomy'");
+		return NULL;
+	}
+
 	// Allocate memory for view structure
 	view = (Obiview_p) malloc(sizeof(Obiview_t));
 	if (view == NULL)
@@ -1838,7 +1846,7 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
 	if (view_to_clone == NULL)
 	{
 		// Adding sequence column
-		if (obi_view_add_column(view, NUC_SEQUENCE_COLUMN, -1, NULL, OBI_SEQ, 0, 1, NULL, NULL, NULL, -1, "Nucleotide sequences", true) < 0)
+		if (obi_view_add_column(view, NUC_SEQUENCE_COLUMN, -1, NULL, OBI_SEQ, 0, 1, NULL, NULL, NULL, -1, "Nucleotide sequences", true) < 0)	// discuss using same indexer "NUC_SEQ_INDEXER"
 		{
 			obidebug(1, "Error adding an obligatory column in a nucleotide sequences view");
 			return NULL;

src/obiview.h

@@ -140,7 +140,7 @@ typedef struct Obiview {
  * Fails if a view with the same name already exists.
  *
  * @param dms A pointer on the OBIDMS.
- * @param view_name The unique name of the view.
+ * @param view_name The unique name of the view. Can not be 'taxonomy' (used for URIs).
  * @param view_to_clone Eventually a pointer on the opened view to clone to create the new one, if there is one. NULL if not.
  * @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
  * 						 if there is one. NULL if there is no line selection or no view to clone.
@@ -165,7 +165,7 @@ Obiview_p obi_new_view(OBIDMS_p dms, const char* view_name, Obiview_p view_to_cl
  * Fails if a view with the same name already exists.
  *
  * @param dms A pointer on the OBIDMS.
- * @param view_name The unique name of the new view.
+ * @param view_name The unique name of the new view. Can not be 'taxonomy' (used for URIs).
  * @param view_to_clone_name The name of the view to clone stored in the view file of the OBIDMS.
  * @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
  * 						 if there is one. NULL if there is no line selection or no view to clone.
@@ -193,7 +193,7 @@ Obiview_p obi_new_view_cloned_from_name(OBIDMS_p dms, const char* view_name, con
  * 	- QUALITY_COLUMN   	  where sequence qualities are stored
  *
  * @param dms A pointer on the OBIDMS.
- * @param view_name The unique name of the view.
+ * @param view_name The unique name of the view. Can not be 'taxonomy' (used for URIs).
  * @param view_to_clone Eventually a pointer on the opened view to clone to create the new one, if there is one. NULL if not.
  * @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
  * 						 if there is one. NULL if there is no line selection or no view to clone.
@@ -227,7 +227,7 @@ Obiview_p obi_new_view_nuc_seqs(OBIDMS_p dms, const char* view_name, Obiview_p v
  * 	- QUALITY_COLUMN   	  where sequence qualities are stored
  *
  * @param dms A pointer on the OBIDMS.
- * @param view_name The unique name of the new view.
+ * @param view_name The unique name of the new view. Can not be 'taxonomy' (used for URIs).
  * @param view_to_clone_name The name of the view to clone stored in the view file of the OBIDMS.
  * @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
  * 						 if there is one. NULL if there is no line selection or no view to clone.
@@ -250,7 +250,7 @@ Obiview_p obi_new_view_nuc_seqs_cloned_from_name(OBIDMS_p dms, const char* view_
  *
  * @param dms A pointer on the OBIDMS.
  * @param view_to_clone A pointer on the opened view to clone to create the new one.
- * @param view_name The unique name of the new view.
+ * @param view_name The unique name of the new view. Can not be 'taxonomy' (used for URIs).
  * @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
  * 						 if there is one. NULL if there is no line selection or no view to clone.
  * @param comments Eventually, comments to associate with the view. NULL if not.
@@ -272,7 +272,7 @@ Obiview_p obi_clone_view(OBIDMS_p dms, Obiview_p view_to_clone, const char* view
  *
  * @param dms A pointer on the OBIDMS.
  * @param view_to_clone_name The name of the view to clone.
- * @param view_name The unique name of the new view.
+ * @param view_name The unique name of the new view. Can not be 'taxonomy' (used for URIs).
  * @param line_selection Eventually a pointer on a list of indexes corresponding to a line selection to use with the view to clone
  * 						 if there is one. NULL if there is no line selection or no view to clone.
  * @param comments Eventually, comments to associate with the view. NULL if not.