Epydoc Log

Epydoc started at Wed Jul 22 10:48:17 2009

In /Users/coissac/encours/OBITools/src/obitools/obischemas/kb/extern.py: Import failed (but source code parsing was successful).

Error: ImportError: No module named psycopg2 (line 14)

File /Users/coissac/encours/OBITools/src/obitools/SVGdraw.py, line 32, in obitools.SVGdraw

Docstring Warning: Line 37: Improper paragraph indentation.

File /Users/coissac/encours/OBITools/src/obitools/carto/__init__.py, line 19, in obitools.carto.Map.__init__

Docstring Warning: Lines 24, 25, 27, 28, 30, 31: Improper paragraph indentation.

File /Users/coissac/encours/OBITools/src/obitools/ecopcr/taxonomy.py, line 14, in obitools.ecopcr.taxonomy.Taxonomy.__init__

Docstring Warning: @param for unknown parameter "path"

File /Users/coissac/encours/OBITools/src/obitools/statistics/hypergeometric.py, line 18, in obitools.statistics.hypergeometric._hyper0

Docstring Warning: Line 23: Improper paragraph indentation.
Docstring Warning: Line 28: Lists must be indented.

File /Users/coissac/encours/OBITools/src/obitools/statistics/hypergeometric.py, line 107, in obitools.statistics.hypergeometric.chypergeometric

Docstring Warning: Line 117: Lists must be indented.

File /Users/coissac/encours/OBITools/src/obitools/statistics/hypergeometric.py, line 77, in obitools.statistics.hypergeometric.hypergeometric

Docstring Warning: Line 87: Lists must be indented.

File /Users/coissac/encours/OBITools/src/obitools/statistics/hypergeometric.py, line 140, in obitools.statistics.hypergeometric.multipleTest

Docstring Warning: Line 148: Lists must be indented.

File /Users/coissac/encours/OBITools/src/obitools/zipfile.py, line 558, in obitools.zipfile.ZipFile

Docstring Warning: Invalid context for u'var'
Docstring Warning: Invalid context for u'var'
Docstring Warning: Invalid context for u'var'
Docstring Warning: Invalid context for u'var'
Error: Error reading pstat file: [Errno 2] No such file or directory: 'profile.out'

Epydoc Options

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css = 'white'
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graph_font = 'Helvetica'
graph_font_size = 10
include_log = True
names = ['src/obitools']
prj_name = 'OBITools'
prj_url = 'http://www.grenoble.prabi.fr/trac/OBITools'
show_imports = True
target = 'doc/html/api'
verbosity = 0
action = 'html'
debug = False
docformat = 'epytext'
exclude = []
exclude_introspect = []
exclude_parse = []
external_api = []
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external_api_root = []
fail_on = None
graphs = ['classtree']
help_file = None
include_source_code = True
inheritance = 'listed'
introspect = True
list_classes_separately = False
load_pickle = False
parse = True
prj_link = None
profile = False
pstat_files = ['profile.out']
quiet = 0
redundant_details = False
show_frames = True
show_private = True
simple_term = False
src_code_tab_width = 8
top_page = None
verbose = 0

Epydoc finished at Wed Jul 22 10:48:44 2009

(Elapsed time: 27 seconds)