Commits · b24f9937807a59292dea0eff767981b88af39415 · OBITools / OBITools

28 Jul, 2016 2 commits
- Remove some false error warning · b24f9937
  Eric Coissac committed Jul 28, 2016
  
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- replace _BYTES call by the new .data.as_uchars to reflect the new API · e0bf25d7
  Eric Coissac committed Jul 28, 2016
  
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06 Jul, 2016 10 commits
- Merge branch 'master' of git.metabarcoding.org:obitools/obitools · a4a854a2
```
Conflicts:
	src/obitools/align/_lcs.ext.4.c

the symbolic link is correctly restored
```
  Eric Coissac committed Jul 06, 2016
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- Small changes on distutils.ext · a186bf43
  Eric Coissac committed Jul 06, 2016
  
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- Merge branch 'windows_version' into 'master' · a6daa709
```
Windows version

This branch allows for compiling OBITools on windows in the cygwin environment.

It asks for installing the following cygwin packages :

      - binutils
      - gcc-core
      - python 2.7

See merge request !1
```
  Aurélie Bonin committed Jul 06, 2016
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- switch to the new version 1.2.7 · 22f98eaa
  abonin committed Jul 06, 2016
  
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- Final switch to the new cython interface on array.array · 38504ab0
  abonin committed Jul 06, 2016
  
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- switch to the new cython interface to array.array · 1b8a867f
  abonin committed Jul 06, 2016
  
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- switch to the new cython interface to array.array · 9a9bd6c6
  abonin committed Jul 06, 2016
  
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- Remove the reference to arrayarray.h · 6002fbaa
  abonin committed Jul 06, 2016
  
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- Adaptation for running with cygwin on windows platform · e869e16d
  Aurélie Bonin committed Jul 06, 2016
  
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- A very small fastq test file · 3a5ad680
  Aurélie Bonin committed Jul 06, 2016
  
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28 Jun, 2016 3 commits
- Rename members of the DNA profil strucuture to potentiel avoid a compile · b8dc49ef
```
bug on windows cygwin
```
  Eric Coissac committed Jun 28, 2016
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- Merge branch 'master' of git@git.metabarcoding.org:obitools/obitools.git · 140f2697
  Eric Coissac committed Jun 28, 2016
  
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- Remove a debug trace in the installer · d96cf371
  Eric Coissac committed Jun 28, 2016
  
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16 Jun, 2016 1 commit
- Fixed a potential bug with the parsing of taxonomic paths when using · 20f1c1d3
```
obitaxonomy after obiaddtaxids on a general UNITE database
```
  Celine Mercier committed Jun 16, 2016
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27 May, 2016 4 commits
- Patch the obitool url on metabarcoding.org · f32ca9e9
  Eric Coissac committed May 27, 2016
  
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- Switch to version 1.2.6 · a06e7910
  Eric Coissac committed May 27, 2016
  
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- Merge branch 'master' of git@git.metabarcoding.org:obitools/obitools.git · 0e2c4861
  Eric Coissac committed May 27, 2016
  
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- Numbering version 1.2.5 · 950bae88
  Celine Mercier committed May 27, 2016
  
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26 May, 2016 2 commits
- Merge branch 'master' of git@git.metabarcoding.org:obitools/obitools.git · 683f3b5b
  Celine Mercier committed May 26, 2016
  
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- Fixed a bug in obitaxonomy sometimes triggering an error when adding a · 54901447
```
new taxon from a file. Also now checks if taxon already in taxonomy.
```
  Celine Mercier committed May 26, 2016
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07 Apr, 2016 1 commit
- for cython to version 0.23.5 the latest 0.23 version · 42a3f984
  Eric Coissac committed Apr 07, 2016
  
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06 Apr, 2016 2 commits
- patch a bug in the sequence counting of obiselect · c395d762
  Eric Coissac committed Apr 06, 2016
  
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- Set the Cython required version to 0.23 because of a bug in the 0.24 · b2d2346e
```
version
```
  Eric Coissac committed Apr 06, 2016
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04 Apr, 2016 2 commits
- Switch to version 1.2.3 · ffb33f61
  Eric Coissac committed Apr 04, 2016
  
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- Fixed major bug with -f UNITE_FULL option of obiaddtaxids · adbeac96
  Celine Mercier committed Apr 04, 2016
  
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30 Mar, 2016 1 commit
- Merge branch 'master' of git.metabarcoding.org:obitools/obitools · 4aac47e6
  Celine Mercier committed Mar 30, 2016
  
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17 Mar, 2016 1 commit
- Fixed typo in obiaddtaxids documentation · 2028c69b
  Celine Mercier committed Mar 17, 2016
  
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12 Jan, 2016 2 commits
- Switch to version 1.2.2 · 2649cd26
  Eric Coissac committed Jan 12, 2016
  
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- Add capacity to filter on merged sequences · 46b446f0
  Eric Coissac committed Jan 12, 2016
  
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08 Jan, 2016 1 commit
- Fixes #20 and several other bugs related to that function · 6208cbee
  Celine Mercier committed Jan 08, 2016
  
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27 Oct, 2015 5 commits
- Patch a bug related to the -E et -M options · 1d4c3f99
  Eric Coissac committed Oct 27, 2015
  
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- Switch the version number to 1.2.1 · ba30e74d
  Eric Coissac committed Oct 27, 2015
  
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- Modify the action of the -M option to fit the documentation · 0e8b97ca
  Eric Coissac committed Oct 27, 2015
  
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- Change the ecotag doc according to the new -M option · a95ae512
  Eric Coissac committed Oct 27, 2015
  
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- Patch bug in the -E option of ecotag and add the -M option to limit the · 0e2f8598
```
action of the -E option 
```
  Eric Coissac committed Oct 27, 2015
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20 Oct, 2015 1 commit
- Add a first version of the obisubset tool and tag the version 1.2.0 · 23717f58
  Eric Coissac committed Oct 20, 2015
  
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02 Oct, 2015 1 commit

Change the way ecoPCRDB are written by obitools. If the obitools is · fdeaf595

called with several sequence files as input when the ecoPCRDB is
requested as output format, the sequences are splitted in several sdx
files

committed Oct 02, 2015

fdeaf595 Browse Files

03 Aug, 2015 1 commit
- Switch to version 1.1.22 · 343d9ec6
  Eric Coissac committed Aug 03, 2015
  
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