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OBITools
OBITools
Commits
2491a562
Commit
2491a562
authored
Sep 24, 2014
by
Eric Coissac
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parent
2f66a775
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3 changed files
with
9 additions
and
9 deletions
+9
-9
setup.py
setup.py
+7
-7
__init__.py
src/obitools/ecopcr/__init__.py
+1
-1
version.py
src/obitools/version.py
+1
-1
No files found.
setup.py
View file @
2491a562
...
...
@@ -193,7 +193,8 @@ def findCython(root,base=None,pyrexs=None):
pyrexs
.
append
(
Extension
(
'.'
.
join
(
base
+
[
module
,
path
.
splitext
(
path
.
basename
(
pyrex
))[
0
]]),[
pyrex
]))
pyrexs
[
-
1
]
.
sources
.
extend
(
glob
.
glob
(
os
.
path
.
splitext
(
pyrex
)[
0
]
+
'.ext.*.c'
))
print
pyrexs
[
-
1
]
.
sources
Main
.
compile
([
pyrex
],
timestamps
=
True
,
recursion
=
True
)
Main
.
compile
([
pyrex
],
timestamps
=
True
)
# Main.compile([pyrex],timestamps=True,recursion=True)
pyrexs
.
extend
(
findCython
(
path
.
join
(
root
,
module
),
base
+
[
module
]))
return
pyrexs
...
...
@@ -220,7 +221,7 @@ def findC(root,base=None,pyrexs=None):
#from obitools.version import version as obiversion
#sys.path.pop(0)
VERSION
=
"1.0.00
0
"
VERSION
=
"1.0.00
2
"
AUTHOR
=
'Eric Coissac'
EMAIL
=
'eric@coissac.eu'
URL
=
'metabarcoding.org/obitools'
...
...
@@ -256,13 +257,12 @@ setup(name="OBITools",
classifiers
=
[
'Development Status :: 5 - Production/Stable'
,
'Environment :: Console'
,
'Intended Audience :: Research'
,
'License ::
CeCILL-V2
'
,
'Operating System :: Unix
like
'
,
'Intended Audience ::
Science/
Research'
,
'License ::
Other/Proprietary License
'
,
'Operating System :: Unix'
,
'Programming Language :: Python'
,
'Programming Language :: Python :: 2'
,
'Topic :: NGS Data processing'
,
'Topic :: DNA metabarcoding'
,
'Topic :: Scientific/Engineering :: Bio-Informatics'
,
'Topic :: Utilities'
,
],
version
=
VERSION
,
...
...
src/obitools/ecopcr/__init__.py
View file @
2491a562
...
...
@@ -8,7 +8,7 @@ import sys
class
EcoPCRFile
(
utils
.
ColumnFile
):
def
__init__
(
self
,
stream
):
utils
.
ColumnFile
.
__init__
(
self
,
stream
,
'
|
'
,
True
,
stream
,
'
|
'
,
True
,
(
str
,
int
,
int
,
str
,
int
,
str
,
int
,
str
,
int
,
...
...
src/obitools/version.py
View file @
2491a562
major
=
1
minor
=
0
serial
=
'00
0
'
serial
=
'00
2
'
version
=
"
%2
d.
%02
d
%
s"
%
(
major
,
minor
,
serial
)
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