Commits · master · OBITools / ecopcr

27 Apr, 2020 2 commits
- Update ecopcr.c to comment a debug message · 3503f665
  Eric Coissac authored Apr 27, 2020
  
  3503f665
- Patch a bug inducing that sequences were considered as circular whatever · 9deb30a8
  Eric Coissac authored Apr 27, 2020
```
the -c option was present or not.
```
  9deb30a8
22 Jan, 2019 1 commit
- Fixed length computation bug introduced in last version · c4321036
  Celine Mercier authored Jan 22, 2019
  
  c4321036
30 Jul, 2018 1 commit
- Fixed version + some git ignore things · a92a7fa0
  Celine Mercier authored Jul 30, 2018
  
  a92a7fa0
26 Jul, 2018 1 commit
- Fixed a bug when primers would touch or overlap, producing amplicons of · bd1db764
  Celine Mercier authored Jul 26, 2018
```
size <= 0
```
  bd1db764
06 Feb, 2017 2 commits
- Version 0.8.0 · f0cca648
  Celine Mercier authored Feb 06, 2017
  
  f0cca648
- Removed deprecated code in ecoPCRFormat · 573bd5ba
  Celine Mercier authored Feb 06, 2017
  
  573bd5ba
03 Feb, 2017 2 commits
- Deleted OS X code specificities · 17387dae
  Celine Mercier authored Feb 03, 2017
  
  17387dae
- Changed compilation flags and fixed typo in ecoPCR help · 18583c4d
  Celine Mercier authored Feb 03, 2017
  
  18583c4d
01 Feb, 2017 2 commits
- Merge branch 'master' of https://git.metabarcoding.org/obitools/ecopcr · 2dd4a217
  Celine Mercier authored Feb 01, 2017
  
  2dd4a217
- Fixing versioning problem with new version 0.6.0 · 9a0d7753
  Celine Mercier authored Feb 01, 2017
  
  9a0d7753
11 Jan, 2017 1 commit
- Add license · b09bd145
  Eric Coissac authored Jan 11, 2017
  
  b09bd145
19 May, 2015 1 commit
- Fixes #2 by adding the missing -D option in the help · 194ec811
  Celine Mercier authored May 19, 2015
  
  194ec811
16 May, 2015 1 commit
- Convert svn:ignore properties to .gitignore. · 126bf806
  Eric Coissac authored May 16, 2015
  
  126bf806
07 Mar, 2013 1 commit
- unsufficient space allocated for handling strings in arguments · 46d086b2
  Frédéric Boyer authored Mar 07, 2013
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@595 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  46d086b2
16 May, 2012 3 commits
- MOD: updated the help to include the -P option · 0a62ff49
  Frédéric Boyer authored May 16, 2012
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@424 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  0a62ff49
- MOD: Added a [P]ath option displaying for each taxon its full path · 2452df90
  Frédéric Boyer authored May 16, 2012
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@423 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  2452df90
- MOD: Corrected condition in getSon to handle the root of the taxonomy · 745d50cf
  Frédéric Boyer authored May 16, 2012
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@422 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  745d50cf
07 May, 2012 2 commits
- remove extra obitools directory from ecoPCR subversion archive · e2fe83fc
  Eric Coissac authored May 07, 2012
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@418 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  e2fe83fc
- MOD: In the printRepeat function, corrected rdelta and ldelta management · 2a118eed
  Frédéric Boyer authored May 07, 2012
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@417 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  2a118eed
04 May, 2012 1 commit

removed the "without temperature" option · 93c530e0

Celine Mercier authored May 04, 2012

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@416 60f365c0-8329-0410-b2a4-ec073aeeaa1d

93c530e0

05 Dec, 2011 1 commit

· 4e5d8893

Eric Coissac authored Dec 05, 2011

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@390 60f365c0-8329-0410-b2a4-ec073aeeaa1d

4e5d8893

19 Jul, 2011 1 commit
- Add management of local taxa from the new extension of the OBI Taxonomy library · 957a59eb
  Eric Coissac authored Jul 19, 2011
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@315 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  957a59eb
30 Jun, 2011 2 commits

delta bug · 9adf426a

Eric Coissac authored Jun 30, 2011

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@310 60f365c0-8329-0410-b2a4-ec073aeeaa1d

9adf426a

delta bug · ae528e48

Eric Coissac authored Jun 30, 2011

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@309 60f365c0-8329-0410-b2a4-ec073aeeaa1d

ae528e48

15 Jun, 2011 1 commit

patch on printing · f53cc6d5

Eric Coissac authored Jun 15, 2011

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@299 60f365c0-8329-0410-b2a4-ec073aeeaa1d

f53cc6d5

25 May, 2011 2 commits

syntax debug on ecopcr.c · 8313c67a

Eric Coissac authored May 25, 2011

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@297 60f365c0-8329-0410-b2a4-ec073aeeaa1d

8313c67a

add an hidden -D option · 01173d22

Eric Coissac authored May 25, 2011

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@296 60f365c0-8329-0410-b2a4-ec073aeeaa1d

01173d22

23 May, 2010 1 commit

patch a bug in Tm computation · 87c24964

Eric Coissac authored May 23, 2010

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@260 60f365c0-8329-0410-b2a4-ec073aeeaa1d

87c24964

24 Feb, 2010 2 commits

patch for 64bits constants · 98678592

Eric Coissac authored Feb 24, 2010

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@244 60f365c0-8329-0410-b2a4-ec073aeeaa1d

98678592

patch Tm calculation to return NaN if one of the two sequence is composed with... · f6f39f58

Eric Coissac authored Feb 24, 2010

patch Tm calculation to return NaN if one of the two sequence is composed with letters different than ACGT

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@243 60f365c0-8329-0410-b2a4-ec073aeeaa1d

f6f39f58

22 Jan, 2010 5 commits

· 7331dd56

Eric Coissac authored Jan 22, 2010

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@242 60f365c0-8329-0410-b2a4-ec073aeeaa1d

7331dd56

· 0214be01

Eric Coissac authored Jan 22, 2010

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@241 60f365c0-8329-0410-b2a4-ec073aeeaa1d

0214be01

· 1c30a860

Eric Coissac authored Jan 22, 2010

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@240 60f365c0-8329-0410-b2a4-ec073aeeaa1d

1c30a860

New version 0.2 of ecoPCR, with Tm computation. · 985d067b

Eric Coissac authored Jan 22, 2010

Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@239 60f365c0-8329-0410-b2a4-ec073aeeaa1d

985d067b

New version 0.2 of ecoPCR, with Tm computation. · f7e25b20

Eric Coissac authored Jan 22, 2010

Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@238 60f365c0-8329-0410-b2a4-ec073aeeaa1d

f7e25b20

13 May, 2009 1 commit

Accept to deal with sequence in lower case · ad6f493d

Eric Coissac authored May 13, 2009

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@217 60f365c0-8329-0410-b2a4-ec073aeeaa1d

ad6f493d

16 May, 2008 1 commit

patch online help in ecoPCR software · 1428cd74

Eric Coissac authored May 16, 2008

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@168 60f365c0-8329-0410-b2a4-ec073aeeaa1d

1428cd74

28 Apr, 2008 2 commits

Sequence circularity, bug correction · 708b7c38

Eric Coissac authored Apr 28, 2008

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@167 60f365c0-8329-0410-b2a4-ec073aeeaa1d

708b7c38

Manage sequence circularity · d863b7e4

Eric Coissac authored Apr 28, 2008

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@166 60f365c0-8329-0410-b2a4-ec073aeeaa1d

d863b7e4