Commits · master · OBITools / ecopcr

22 Jan, 2019 1 commit
- Fixed length computation bug introduced in last version · c4321036
  Celine Mercier committed Jan 22, 2019
  
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30 Jul, 2018 1 commit
- Fixed version + some git ignore things · a92a7fa0
  Celine Mercier committed Jul 30, 2018
  
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26 Jul, 2018 1 commit
- Fixed a bug when primers would touch or overlap, producing amplicons of · bd1db764
```
size <= 0
```
  Celine Mercier committed Jul 26, 2018
  bd1db764 Browse Files
06 Feb, 2017 2 commits
- Version 0.8.0 · f0cca648
  Celine Mercier committed Feb 06, 2017
  
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- Removed deprecated code in ecoPCRFormat · 573bd5ba
  Celine Mercier committed Feb 06, 2017
  
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03 Feb, 2017 2 commits
- Deleted OS X code specificities · 17387dae
  Celine Mercier committed Feb 03, 2017
  
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- Changed compilation flags and fixed typo in ecoPCR help · 18583c4d
  Celine Mercier committed Feb 03, 2017
  
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01 Feb, 2017 2 commits
- Merge branch 'master' of https://git.metabarcoding.org/obitools/ecopcr · 2dd4a217
  Celine Mercier committed Feb 01, 2017
  
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- Fixing versioning problem with new version 0.6.0 · 9a0d7753
  Celine Mercier committed Feb 01, 2017
  
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11 Jan, 2017 1 commit
- Add license · b09bd145
  Eric Coissac committed Jan 11, 2017
  
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19 May, 2015 1 commit
- Fixes #2 by adding the missing -D option in the help · 194ec811
  Celine Mercier committed May 19, 2015
  
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16 May, 2015 1 commit
- Convert svn:ignore properties to .gitignore. · 126bf806
  Eric Coissac committed May 16, 2015
  
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07 Mar, 2013 1 commit
- unsufficient space allocated for handling strings in arguments · 46d086b2
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@595 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed Mar 07, 2013
  46d086b2 Browse Files
16 May, 2012 3 commits
- MOD: updated the help to include the -P option · 0a62ff49
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@424 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed May 16, 2012
  0a62ff49 Browse Files
- MOD: Added a [P]ath option displaying for each taxon its full path · 2452df90
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@423 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed May 16, 2012
  2452df90 Browse Files
- MOD: Corrected condition in getSon to handle the root of the taxonomy · 745d50cf
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@422 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed May 16, 2012
  745d50cf Browse Files
07 May, 2012 2 commits
- remove extra obitools directory from ecoPCR subversion archive · e2fe83fc
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@418 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed May 07, 2012
  e2fe83fc Browse Files
- MOD: In the printRepeat function, corrected rdelta and ldelta management · 2a118eed
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@417 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed May 07, 2012
  2a118eed Browse Files
04 May, 2012 1 commit

removed the "without temperature" option · 93c530e0

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@416 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed May 04, 2012

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05 Dec, 2011 1 commit
- git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@390… · 4e5d8893
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@390 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed Dec 05, 2011
  4e5d8893 Browse Files
19 Jul, 2011 1 commit
- Add management of local taxa from the new extension of the OBI Taxonomy library · 957a59eb
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@315 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed Jul 19, 2011
  957a59eb Browse Files
30 Jun, 2011 2 commits

delta bug · 9adf426a

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@310 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Jun 30, 2011

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delta bug · ae528e48

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@309 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Jun 30, 2011

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15 Jun, 2011 1 commit

patch on printing · f53cc6d5

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@299 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Jun 15, 2011

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25 May, 2011 2 commits

syntax debug on ecopcr.c · 8313c67a

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@297 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed May 25, 2011

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add an hidden -D option · 01173d22

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@296 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed May 25, 2011

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23 May, 2010 1 commit

patch a bug in Tm computation · 87c24964

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@260 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed May 23, 2010

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24 Feb, 2010 2 commits

patch for 64bits constants · 98678592

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@244 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Feb 24, 2010

98678592 Browse Files

patch Tm calculation to return NaN if one of the two sequence is composed with… · f6f39f58

patch Tm calculation to return NaN if one of the two sequence is composed with letters different than ACGT

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@243 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Feb 24, 2010

f6f39f58 Browse Files

22 Jan, 2010 5 commits

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@242… · 7331dd56
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@242 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
Eric Coissac committed Jan 22, 2010
7331dd56 Browse Files
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@241… · 0214be01
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@241 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
Eric Coissac committed Jan 22, 2010
0214be01 Browse Files
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@240… · 1c30a860
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@240 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
Eric Coissac committed Jan 22, 2010
1c30a860 Browse Files

New version 0.2 of ecoPCR, with Tm computation. · 985d067b

Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@239 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Jan 22, 2010

985d067b Browse Files

New version 0.2 of ecoPCR, with Tm computation. · f7e25b20

Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@238 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Jan 22, 2010

f7e25b20 Browse Files

13 May, 2009 1 commit

Accept to deal with sequence in lower case · ad6f493d

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@217 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed May 13, 2009

ad6f493d Browse Files

16 May, 2008 1 commit

patch online help in ecoPCR software · 1428cd74

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@168 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed May 16, 2008

1428cd74 Browse Files

28 Apr, 2008 2 commits

Sequence circularity, bug correction · 708b7c38

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@167 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Apr 28, 2008

708b7c38 Browse Files

Manage sequence circularity · d863b7e4

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@166 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed Apr 28, 2008

d863b7e4 Browse Files

12 Mar, 2008 1 commit
- change reference column for taxonomy filtering in ecogrep.c · 4b74056a
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@165 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed Mar 12, 2008
  4b74056a Browse Files
08 Feb, 2008 1 commit
- Add option to ecoPCRFormat to deal with an obischema db as taxonomy source · f68f4af2
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@158 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed Feb 08, 2008
  f68f4af2 Browse Files