Commits · master · OBITools / ecopcr

06 Feb, 2017 2 commits
- Version 0.8.0 · f0cca648
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  Celine Mercier committed 2017-02-06 14:34:57 +0100
- Removed deprecated code in ecoPCRFormat · 573bd5ba
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  Celine Mercier committed 2017-02-06 11:24:32 +0100
03 Feb, 2017 2 commits
- Deleted OS X code specificities · 17387dae
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  Celine Mercier committed 2017-02-03 13:56:32 +0100
- Changed compilation flags and fixed typo in ecoPCR help · 18583c4d
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  Celine Mercier committed 2017-02-03 11:36:36 +0100
01 Feb, 2017 2 commits
- Merge branch 'master' of https://git.metabarcoding.org/obitools/ecopcr · 2dd4a217
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  Celine Mercier committed 2017-02-01 17:12:18 +0100
- Fixing versioning problem with new version 0.6.0 · 9a0d7753
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  Celine Mercier committed 2017-02-01 16:50:07 +0100
11 Jan, 2017 1 commit
- Add license · b09bd145
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  Eric Coissac committed 2017-01-11 13:01:41 +0100
19 May, 2015 1 commit
- Fixes #2 by adding the missing -D option in the help · 194ec811
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  Celine Mercier committed 2015-05-19 13:52:35 +0200
16 May, 2015 1 commit
- Convert svn:ignore properties to .gitignore. · 126bf806
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  Eric Coissac committed 2015-05-16 17:51:46 +0200
07 Mar, 2013 1 commit
- unsufficient space allocated for handling strings in arguments · 46d086b2 ...
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```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@595 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed 2013-03-07 09:25:16 +0000
16 May, 2012 3 commits
- MOD: updated the help to include the -P option · 0a62ff49 ...
  0a62ff49 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@424 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed 2012-05-16 11:56:36 +0000
- MOD: Added a [P]ath option displaying for each taxon its full path · 2452df90 ...
  2452df90 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@423 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed 2012-05-16 11:43:33 +0000
- MOD: Corrected condition in getSon to handle the root of the taxonomy · 745d50cf ...
  745d50cf Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@422 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed 2012-05-16 07:52:28 +0000
07 May, 2012 2 commits
- remove extra obitools directory from ecoPCR subversion archive · e2fe83fc ...
  e2fe83fc Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@418 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2012-05-07 09:31:08 +0000
- MOD: In the printRepeat function, corrected rdelta and ldelta management · 2a118eed ...
  2a118eed Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@417 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Frédéric Boyer committed 2012-05-07 09:14:09 +0000
04 May, 2012 1 commit
- removed the "without temperature" option · 93c530e0 ...
  93c530e0 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@416 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Celine Mercier committed 2012-05-04 14:53:33 +0000
05 Dec, 2011 1 commit
- git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@390 60f365c… · 4e5d8893 ...
  4e5d8893 Browse Files
```
…0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2011-12-05 12:59:34 +0000
19 Jul, 2011 1 commit
- Add management of local taxa from the new extension of the OBI Taxonomy library · 957a59eb ...
  957a59eb Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@315 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2011-07-19 06:44:47 +0000
30 Jun, 2011 2 commits

delta bug · 9adf426a ...

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@310 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2011-06-30 15:26:36 +0000

delta bug · ae528e48 ...

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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@309 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2011-06-30 15:12:38 +0000

15 Jun, 2011 1 commit

patch on printing · f53cc6d5 ...

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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@299 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2011-06-15 21:54:33 +0000

25 May, 2011 2 commits

syntax debug on ecopcr.c · 8313c67a ...

8313c67a Browse Files

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@297 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2011-05-25 16:35:30 +0000

add an hidden -D option · 01173d22 ...

01173d22 Browse Files

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@296 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2011-05-25 15:41:22 +0000

23 May, 2010 1 commit

patch a bug in Tm computation · 87c24964 ...

87c24964

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@260 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2010-05-23 12:30:16 +0000

24 Feb, 2010 2 commits
- patch for 64bits constants · 98678592 ...
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```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@244 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-02-24 15:10:11 +0000
- patch Tm calculation to return NaN if one of the two sequence is composed with l… · f6f39f58 ...
  f6f39f58 Browse Files
```
…etters different than ACGT

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@243 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-02-24 15:00:11 +0000
22 Jan, 2010 5 commits
- git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@242 60f365c… · 7331dd56 ...
  7331dd56 Browse Files
```
…0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-01-22 09:21:04 +0000
- git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@241 60f365c… · 0214be01 ...
  0214be01 Browse Files
```
…0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-01-22 09:20:09 +0000
- git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@240 60f365c… · 1c30a860 ...
  1c30a860 Browse Files
```
…0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-01-22 09:19:36 +0000
- New version 0.2 of ecoPCR, with Tm computation. · 985d067b ...
  985d067b Browse Files
```
Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@239 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-01-22 09:19:19 +0000
- New version 0.2 of ecoPCR, with Tm computation. · f7e25b20 ...
  f7e25b20 Browse Files
```
Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@238 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2010-01-22 09:16:53 +0000
13 May, 2009 1 commit

Accept to deal with sequence in lower case · ad6f493d ...

ad6f493d

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@217 60f365c0-8329-0410-b2a4-ec073aeeaa1d

committed 2009-05-13 13:21:10 +0000

16 May, 2008 1 commit
- patch online help in ecoPCR software · 1428cd74 ...
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```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@168 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2008-05-16 08:53:11 +0000
28 Apr, 2008 2 commits
- Sequence circularity, bug correction · 708b7c38 ...
  708b7c38 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@167 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2008-04-28 16:46:18 +0000
- Manage sequence circularity · d863b7e4 ...
  d863b7e4 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@166 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2008-04-28 15:49:12 +0000
12 Mar, 2008 1 commit
- change reference column for taxonomy filtering in ecogrep.c · 4b74056a ...
  4b74056a Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@165 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2008-03-12 21:26:08 +0000
08 Feb, 2008 1 commit
- Add option to ecoPCRFormat to deal with an obischema db as taxonomy source · f68f4af2 ...
  f68f4af2 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@158 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2008-02-08 10:27:42 +0000
24 Sep, 2007 3 commits
- -- · a1141a77 ...
  a1141a77 Browse Files
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@119 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2007-09-24 10:10:03 +0000
- Add version file · 68352063 ...
  68352063
```
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@118 60f365c0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2007-09-24 10:07:39 +0000
- git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@117 60f365c… · 45c85a9f ...
  45c85a9f Browse Files
```
…0-8329-0410-b2a4-ec073aeeaa1d
```
  Eric Coissac committed 2007-09-24 10:06:00 +0000