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Home · Changes

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coissac created page: home authored Nov 10, 2015 by Celine Mercier's avatar Celine Mercier
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home.markdown
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......@@ -14,20 +14,26 @@ ecoPCR
terms of taxonomical discrimination capacity (barcode specificity,
Bs ).
`ecoPCR` is an electronic PCR software developed by LECA
([LECA](http://www-leca.ujf-grenoble.fr/)). It helps
you to estimate Barcode primers quality. In conjunction with
[OBITools](https://git.metabarcoding.org/obitools/obitools/wikis/home) you can
postprocess ecoPCR output to compute barcode coverage and barcode
specificity. New barcode primers can be developed using the
[ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home)
software.
`ecoPCR` is an electronic PCR software developed by the [LECA](http://www-leca.ujf-grenoble.fr/). It helps you estimate Barcode primers quality. In conjunction with [OBITools](https://git.metabarcoding.org/obitools/obitools/wikis/home), you can postprocess ecoPCR output to compute barcode coverage and barcode specificity. New barcode primers can be developed using the
[ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home) software.
Currently, `ecoPCR` is available as a local program that you can download and install on unix-like machines.
## Installing ecoPCR
Download the archive on this page, then untar it, go into the src directory in the newly created directory, and compile:
Currently, ecoPCR is available as a local program that you can download and 
install on unix like machine.
tar –zxvf ecoPCR.tar.gz
cd ecoPCR/src/
make
You can find the documentation [here](http://metabarcoding.org/obitools/doc/scripts/ecoPCR.html).
## See also
[ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home)
[ecoPCR Documentation](http://metabarcoding.org/obitools/doc/scripts/ecoPCR.html)
## Download
[ecoPCR.tar.gz](https://git.metabarcoding.org/obitools/ecopcr/uploads/d9d948afac087657225f60f873d912a8/ecoPCR.tar.gz)
[wiki:EcoDownload Download source][BR](BR "wikilink")
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