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Home · Changes

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coissac created page: home authored Nov 10, 2015 by Celine Mercier's avatar Celine Mercier
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...@@ -14,20 +14,26 @@ ecoPCR ...@@ -14,20 +14,26 @@ ecoPCR
terms of taxonomical discrimination capacity (barcode specificity, terms of taxonomical discrimination capacity (barcode specificity,
Bs ). Bs ).
`ecoPCR` is an electronic PCR software developed by LECA `ecoPCR` is an electronic PCR software developed by the [LECA](http://www-leca.ujf-grenoble.fr/). It helps you estimate Barcode primers quality. In conjunction with [OBITools](https://git.metabarcoding.org/obitools/obitools/wikis/home), you can postprocess ecoPCR output to compute barcode coverage and barcode specificity. New barcode primers can be developed using the
([LECA](http://www-leca.ujf-grenoble.fr/)). It helps [ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home) software.
you to estimate Barcode primers quality. In conjunction with
[OBITools](https://git.metabarcoding.org/obitools/obitools/wikis/home) you can Currently, `ecoPCR` is available as a local program that you can download and install on unix-like machines.
postprocess ecoPCR output to compute barcode coverage and barcode
specificity. New barcode primers can be developed using the ## Installing ecoPCR
[ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home)
software. Download the archive on this page, then untar it, go into the src directory in the newly created directory, and compile:
tar –zxvf ecoPCR.tar.gz
cd ecoPCR/src/
make
You can find the documentation [here](http://metabarcoding.org/obitools/doc/scripts/ecoPCR.html).
Currently, ecoPCR is available as a local program that you can download and  ## See also
install on unix like machine.
[ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home) [ecoPrimers](https://git.metabarcoding.org/obitools/ecoprimers/wikis/home)
## Download
[ecoPCR Documentation](http://metabarcoding.org/obitools/doc/scripts/ecoPCR.html) [ecoPCR.tar.gz](https://git.metabarcoding.org/obitools/ecopcr/uploads/d9d948afac087657225f60f873d912a8/ecoPCR.tar.gz)
[wiki:EcoDownload Download source][BR](BR "wikilink")
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